RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ADAM30Q9UKF2 790 aa10.54□□□□□ -0.72
SYNPO2-201ENST00000307142 CDH7Q9ULB5 785 aa10.54□□□□□ -0.72
SYNPO2-201ENST00000307142 TMEM265A0A087WTH1 108 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 KIF1CO43896 1103 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 LYPLA1O75608 230 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SAGP10523 405 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 CEBPBP17676 345 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 PPIBP23284 216 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC1A2P43004 574 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 CLCQ05315 142 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 OLFML1Q6UWY5 402 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 OR10T2Q8NGX3 314 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 ATOH1Q92858 354 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 FCRL5Q96RD9 977 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 YIPF3Q9GZM5 350 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 MYLK2Q9H1R3 596 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SIX4Q9UIU6 781 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 A6NCN8 305 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 VPS26BQ4G0F5 336 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 ZNF542PQ5EBM4 170 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 CLEC6AQ6EIG7 209 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 RTL4Q6ZR62 310 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 BTN2A1Q7KYR7 527 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 AADATQ8N5Z0 425 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 TSACCQ96A04 125 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 GEMIN8Q9NWZ8 242 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 TPD52L2O43399 206 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 LDB2O43679 373 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SRPRAP08240 638 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 OGNP20774 298 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 ATP5A1P25705 553 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 GRIA3P42263 894 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 MLLT6P55198 1093 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SOX4Q06945 474 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 METTL27Q8N6F8 245 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 MTERF1Q99551 399 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 FEM1AQ9BSK4 669 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 WDR6Q9NNW5 1121 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SPAG4Q9NPE6 437 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 A0A1W2PPM1 405 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 ZNF840PA6NDX5 716 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 CNTN5O94779 1100 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 DRD1P21728 446 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 PSMB9P28065 219 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 TALDO1P37837 337 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 KLC1Q07866 573 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 C1orf61Q13536 156 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 INO80DQ53TQ3 878 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 STRCP1A6NGW2 1772 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SUV39H1O43463 412 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SDC3O75056 442 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 LAMP2P13473 410 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 CCNA2P20248 432 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 LGALS3BPQ08380 585 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC8B1Q6J4K2 584 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 GPR151Q8TDV0 419 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 ANKRD7Q92527 254 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 IGSF9Q9P2J2 1179 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 TAC3Q9UHF0 121 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 IGLON5A6NGN9 336 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 NIPSNAP2O75323 286 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 UROSP10746 265 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SCTRP47872 440 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 IDH2P48735 452 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 HNMTP50135 292 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 NCBP2P52298 156 aaKnown RBP eCLIP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 RAB33AQ14088 237 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 ANKRD22Q5VYY1 191 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 KRT77Q7Z794 578 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 KBTBD6Q86V97 674 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 ZMIZ2Q8NF64 920 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC47A1Q96FL8 570 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 TUBGCP5Q96RT8 1024 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 HBEGFQ99075 208 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 RACGAP1Q9H0H5 632 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 PNPOQ9NVS9 261 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 C19orf25Q9UFG5 118 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 LTBP4Q8N2S1 1624 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 TOGARAM1Q9Y4F4 1720 aa10.53□□□□□ -0.72
SYNPO2-201ENST00000307142 RGSL1A5PLK6 1076 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 MID1O15344 667 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 WFS1O76024 890 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 TGFB1P01137 390 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 COL6A2P12110 1019 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 POLR2CP19387 275 aaPredicted RBP10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 CRHR1P34998 444 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 SCNN1AP37088 669 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 CLCN7P51798 805 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 FAM91A1Q658Y4 838 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 TGM7Q96PF1 710 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 ZDHHC7Q9NXF8 308 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 HDAC3O15379 428 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 SLC7A4O43246 635 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 B4GALT2O60909 372 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 MPSTP25325 297 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 PTP4A2Q12974 167 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 FASTKD3Q14CZ7 662 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms