RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 TESMINQ9Y4I5 508 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 UGT2A1Q9Y4X1 527 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 PCDHGA7Q9Y5G6 932 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 C2orf78A6NCI8 922 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 TTC34A8MYJ7 566 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 PMPCBO75439 489 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 ENDOD1O94919 500 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 HK2P52789 917 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 MLLT6P55198 1093 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 CBX2Q14781 532 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 PCSK7Q16549 785 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 TYSND1Q2T9J0 566 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 INTS11Q5TA45 600 aaKnown RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 SIGIRRQ6IA17 410 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 MFSD2AQ8NA29 543 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 CENPIQ92674 756 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 PSMG2Q969U7 264 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 TUBGCP3Q96CW5 907 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 PKMYT1Q99640 499 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 ATP13A1Q9HD20 1204 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 C8orf4Q9NR00 106 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 PAQR5Q9NXK6 330 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 DTLQ9NZJ0 730 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 TIMM22Q9Y584 194 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 ANK1P16157 1881 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 C3orf70A6NLC5 250 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 TBL1XO60907 577 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 TSPAN8P19075 237 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 PBX2P40425 430 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 KCNK10P57789 538 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 SLC36A3Q495N2 470 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 TIGD7Q6NT04 549 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 HMBOX1Q6NT76 420 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 LEMD2Q8NC56 503 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 IPMKQ8NFU5 416 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 PSD2Q9BQI7 771 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 NT5MQ9NPB1 228 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 CCM2LQ9NUG4 571 aaPredicted RBP10.75□□□□□ -0.69
LSM3-201ENST00000306024 OXSMQ9NWU1 459 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 HS3ST4Q9Y661 456 aa10.75□□□□□ -0.69
LSM3-201ENST00000306024 ANKRD12Q6UB98 2062 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 LOC100506127A0A0U1RQW1 187 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 AQP12BA6NM10 295 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 ZNF99A8MXY4 864 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 HACD1B0YJ81 288 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TRIM24O15164 1050 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 ABLIM3O94929 683 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 GTF2E2P29084 291 aaKnown RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 RPS24P62847 133 aaKnown RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 SPANXN3Q5MJ09 141 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 CCBE1Q6UXH8 406 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 KCNMB4Q86W47 210 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 AQP12AQ8IXF9 295 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TRPV3Q8NET8 790 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TIFAQ96CG3 184 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TTYH2Q9BSA4 534 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 OSBPL2Q9H1P3 480 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 CCDC177Q9NQR7 707 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 OSER1Q9NX31 292 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 MFHAS1Q9Y4C4 1052 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 HMX2A2RU54 273 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 PRKD3O94806 890 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TPSB2P20231 275 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 ARRB2P32121 409 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 RECQLP46063 649 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 PGFP49763 221 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TPSAB1Q15661 275 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 VPS26BQ4G0F5 336 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 MARC1Q5VT66 337 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 FBXL22Q6P050 247 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 SPESP1Q6UW49 350 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 BPHLQ86WA6 291 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 SVOPQ8N4V2 548 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 PQLC3Q8N755 202 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 OR52K1Q8NGK4 314 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 P2RY11Q96G91 374 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 VPS35Q96QK1 796 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 GPN2Q9H9Y4 310 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 FNDC3AQ9Y2H6 1198 aaKnown RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 RFXAPO00287 272 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 ZW10O43264 779 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 GCATO75600 419 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 GPIP06744 558 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TPH1P17752 444 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 PSMB4P28070 264 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 NNMTP40261 264 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 TOP3AQ13472 1001 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 CSHL1Q14406 222 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 MEP1AQ16819 746 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 RAB44Q7Z6P3 723 aaPredicted RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 FAM20CQ8IXL6 584 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 AMER2Q8N7J2 671 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 GALNT6Q8NCL4 622 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
LSM3-201ENST00000306024 RBBP8Q99708 897 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 HOXD1Q9GZZ0 328 aa10.74□□□□□ -0.69
LSM3-201ENST00000306024 SMG9Q9H0W8 520 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms