RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TLR9Q9NR96 1032 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 NUDT4Q9NZJ9 180 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
HIF3A-204ENST00000300862 C1orf232A0A0U1RR37 186 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 TMEM221A6NGB7 291 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 H7C0S8 307 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 GAPDHSO14556 408 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 CLDN7O95471 211 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 ENO2P09104 434 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 NFKBIAP25963 317 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 HMOX2P30519 316 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 HMGCLP35914 325 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 CCL23P55773 120 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 NAA20P61599 178 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 TRAF3Q13114 568 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 DHRSXQ8N5I4 330 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 SLC43A3Q8NBI5 491 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 CLHC1Q8NHS4 586 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 RAET1EQ8TD07 263 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 ISG20Q96AZ6 181 aaKnown RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 C12orf43Q96C57 262 aaKnown RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 MTFMTQ96DP5 389 aaKnown RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 MYO19Q96H55 970 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 NSMCE2Q96MF7 247 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 CWH43Q9H720 699 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 PFDN4Q9NQP4 134 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 VAPAQ9P0L0 249 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 CDC14AQ9UNH5 594 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 PIKFYVEQ9Y2I7 2098 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 TRIM64CA6NLI5 447 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 FZD6O60353 706 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 S100BP04271 92 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 IST1P53990 364 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 NUP107P57740 925 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 CDH18Q13634 790 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 ARMC12Q5T9G4 340 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 GPR141Q7Z602 305 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 DEFB128Q7Z7B8 93 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 TBC1D21Q8IYX1 336 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 PIH1D2Q8WWB5 315 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 SEPT8Q92599 483 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 CGREF1Q99674 301 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 TNKS2Q9H2K2 1166 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 IL26Q9NPH9 171 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 HEBP1Q9NRV9 189 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 SMPD3Q9NY59 655 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-204ENST00000300862 SRRDQ9UH36 339 aa12.68□□□□□ -0.38
HIF3A-204ENST00000300862 ANKRD28O15084 1053 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 B4GAT1O43505 415 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 BNIP3LO60238 219 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 FCGR1AP12314 374 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 HTR1EP28566 365 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 PPP1R8Q12972 351 aaKnown RBP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 PCBP2Q15366 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 AASDHQ4L235 1098 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 SLC44A4Q53GD3 710 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 TXNDC8Q6A555 127 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 ADAMTSL2Q86TH1 951 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 KRTCAP2Q8N6L1 136 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 ARL14EPQ8N8R7 260 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 GOLM1Q8NBJ4 401 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 GIPC3Q8TF64 312 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 AUTS2Q8WXX7 1259 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 FIG4Q92562 907 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 TBCDQ9BTW9 1192 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 IKZF5Q9H5V7 419 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 CARS2Q9HA77 564 aaKnown RBP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 LTB4R2Q9NPC1 389 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 INIPQ9NRY2 104 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 KLQ9UEF7 1012 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 CLEC4EQ9ULY5 219 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 YIPF1Q9Y548 306 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 ANGPTL3Q9Y5C1 460 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 ST14Q9Y5Y6 855 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 A0A087WXM4 84 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 TYW5A2RUC4 315 aaKnown RBP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 RAD51BO15315 384 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 PGLSO95336 258 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 TCF3P15923 654 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 CAPGP40121 348 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 FAM174BQ3ZCQ3 159 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 KCTD21Q4G0X4 260 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
HIF3A-204ENST00000300862 ADGRG2Q8IZP9 1017 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 CRIPAKQ8N1N5 446 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 STK40Q8N2I9 435 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 NTN4Q9HB63 628 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 ZFYVE1Q9HBF4 777 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 UTS2RQ9UKP6 389 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 NEUROG3Q9Y4Z2 214 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 OR51B4Q9Y5P0 310 aa12.67□□□□□ -0.38
HIF3A-204ENST00000300862 KANSL1LA0AUZ9 987 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 PQBP1O60828 265 aaKnown RBP12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ATE1O95260 518 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 OTCP00480 354 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 INHAP05111 366 aa12.66□□□□□ -0.38
HIF3A-204ENST00000300862 ZNF7P17097 686 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms