RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 OR2T3Q8NH03 318 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ART5Q96L15 291 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 NMUR2Q9GZQ4 415 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 FZD9O00144 591 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 TNFP01375 233 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 IFNW1P05000 195 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 CCNFP41002 786 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 LIPEQ05469 1076 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 CYP2U1Q7Z449 544 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 GALNT7Q86SF2 657 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ZNF433Q8N7K0 673 aaPredicted RBP17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ZNF516Q92618 1163 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 CLPTM1LQ96KA5 538 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 CLK4Q9HAZ1 481 aaKnown RBP17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ZNF180Q9UJW8 692 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 COL14A1Q05707 1796 aaKnown RBP17.04■□□□□ 0.32
SHANK1-201ENST00000293441 OR51F1A6NGY5 319 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 DSN1Q9H410 356 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 ZNF304Q9HCX3 659 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 OAS3Q9Y6K5 1087 aaKnown RBP17.03■□□□□ 0.32
SHANK1-201ENST00000293441 PLOD3O60568 738 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A9O60656 530 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 HCN1O60741 890 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 MT-ND1P03886 318 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A6P19224 532 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A1P22309 533 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A4P22310 534 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A3P35503 534 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 PAOXQ6QHF9 649 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 FRRS1Q6ZNA5 592 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 RANBP3LQ86VV4 465 aaPredicted RBP17.03■□□□□ 0.32
SHANK1-201ENST00000293441 SLC35G5Q96KT7 338 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 RIOK2Q9BVS4 552 aaKnown RBP17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A7Q9HAW7 530 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A10Q9HAW8 530 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 UGT1A8Q9HAW9 530 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 CDH7Q9ULB5 785 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 FADS2P1A8MWK0 482 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 PPP2R2BQ00005 443 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 SIM2Q14190 667 aaPredicted RBP17.03■□□□□ 0.32
SHANK1-201ENST00000293441 QPRTQ15274 297 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 RAB30Q15771 203 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 C11orf65Q8NCR3 313 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 CCNB1IP1Q9NPC3 277 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 INPPL1O15357 1258 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 NDUFA5Q16718 116 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 PHF19Q5T6S3 580 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 MTERF1Q99551 399 aaKnown RBP17.03■□□□□ 0.32
SHANK1-201ENST00000293441 CCDC162PA2VCL2 907 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 CPSF4LA6NMK7 179 aaKnown RBP17.03■□□□□ 0.32
SHANK1-201ENST00000293441 LCA5LO95447 670 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 C9P02748 559 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 HLA-DQB2P05538 268 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 TBC1D25Q3MII6 688 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 SIPA1Q96FS4 1042 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 TLR9Q9NR96 1032 aa17.03■□□□□ 0.32
SHANK1-201ENST00000293441 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 OGNP20774 298 aaKnown RBP17.02■□□□□ 0.32
SHANK1-201ENST00000293441 ADGRF1Q5T601 910 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 GRASPQ7Z6J2 395 aaPredicted RBP17.02■□□□□ 0.32
SHANK1-201ENST00000293441 CELF5Q8N6W0 485 aaKnown RBP17.02■□□□□ 0.32
SHANK1-201ENST00000293441 PLGRKTQ9HBL7 147 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 A8MUA0 341 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 MAGEB17A8MXT2 336 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 PDPK1O15530 556 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 PI15O43692 258 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 CCKBRP32239 447 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 RIPK1Q13546 671 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 SNX33Q8WV41 574 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 A8MU76 341 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 BCKDKO14874 412 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 TEAD2Q15562 447 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 OLFML2AQ68BL7 652 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 GPR65Q8IYL9 337 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 PJA1Q8NG27 643 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 PIGXQ8TBF5 258 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 COX4I2Q96KJ9 171 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 CIB1Q99828 191 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
SHANK1-201ENST00000293441 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.31
SHANK1-201ENST00000293441 A0A1W2PQY0 241 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 GNB5O14775 395 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 AHCYP23526 432 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 RBM44Q6ZP01 1051 aaKnown RBP17.02■□□□□ 0.31
SHANK1-201ENST00000293441 PCDHGA11Q9Y5H2 935 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 IRAK3Q9Y616 596 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 SLC7A4O43246 635 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 MTX2O75431 263 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 GNAZP19086 355 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 ENPEPQ07075 957 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 AAGABQ6PD74 315 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 FSTL5Q8N475 847 aaPredicted RBP17.02■□□□□ 0.31
SHANK1-201ENST00000293441 GPR151Q8TDV0 419 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 SLC38A4Q969I6 547 aa17.02■□□□□ 0.31
SHANK1-201ENST00000293441 RBM4BQ9BQ04 359 aaKnown RBP17.02■□□□□ 0.31
SHANK1-201ENST00000293441 RBM4Q9BWF3 364 aaKnown RBP17.02■□□□□ 0.31
SHANK1-201ENST00000293441 ALG2Q9H553 416 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms