RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CLDN4O14493 209 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 PSMA1P25786 263 aaKnown RBP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 SNAPC1Q16533 368 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 PRSS55Q6UWB4 352 aaPredicted RBP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 LRRC70Q7Z2Q7 622 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 IRAK3Q9Y616 596 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 ARL5AQ9Y689 179 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 NFKBIEO00221 500 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 LDOC1O95751 146 aaPredicted RBP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 OMPP47874 163 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 SIM2Q14190 667 aaPredicted RBP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 PLEKHG4Q58EX7 1191 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 RPTNQ6XPR3 784 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 PIGXQ8TBF5 258 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 BRI3BPQ8WY22 251 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 FCGR1BQ92637 280 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 C1orf21Q9H246 121 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 MAP4K5Q9Y4K4 846 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 COL1A1P02452 1464 aaPredicted RBP12.6□□□□□ -0.39
PTCD1-201ENST00000292478 FFAR2O15552 330 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 FSTL1Q12841 308 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 GRB14Q14449 540 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 PIK3R6Q5UE93 754 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 IFNL1Q8IU54 200 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 OR10A6Q8NH74 314 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 CAPNS2Q96L46 248 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 RETREG1Q9H6L5 497 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 VRTNQ9H8Y1 702 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 CD84Q9UIB8 345 aa12.6□□□□□ -0.39
PTCD1-201ENST00000292478 ABHD14A-ACY1A0A1B0GW23 586 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PRORSD1PA6NEY8 169 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CASKO14936 926 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CD247P20963 164 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 AQP1P29972 269 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SDC2P34741 201 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CSKP41240 450 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 MLLT6P55198 1093 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 AP1S2P56377 157 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 RGS8P57771 180 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SRP54P61011 504 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PRKCZQ05513 592 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SLC9B1Q4ZJI4 515 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 UBXN11Q5T124 520 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 FAM171BQ6P995 826 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 GALNT5Q7Z7M9 940 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 EXOSC8Q96B26 276 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SLC29A3Q9BZD2 475 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SUV39H2Q9H5I1 410 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ITM2CQ9NQX7 267 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 TCRBV7S3A2A0A539 114 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ARVCFO00192 962 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 AREL1O15033 823 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PRPS1L1P21108 318 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PRKCHP24723 683 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 FAUP35544 74 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 KHKP50053 298 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 TOMM20Q15388 145 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 FBXL22Q6P050 247 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 RANBP3LQ86VV4 465 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF563Q8TA94 476 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 NAT14Q8WUY8 206 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ASB9Q96DX5 294 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CDKN2AIPNLQ96HQ2 116 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 YTHDF1Q9BYJ9 559 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 BRINP2Q9C0B6 783 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 RSPH9Q9H1X1 276 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 MINDY3Q9H8M7 445 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 GPN3Q9UHW5 284 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 UGT1A9O60656 530 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 TCF4P15884 667 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ITGAXP20702 1163 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CDH3P22223 829 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PEX2P28328 305 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 HOXD13P35453 343 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CYP2U1Q7Z449 544 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CPNE8Q86YQ8 564 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 OR14C36Q8NHC7 312 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 NODALQ96S42 347 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 GPR22Q99680 433 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 EFCAB11Q9BUY7 163 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SLC28A3Q9HAS3 691 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 UGT1A7Q9HAW7 530 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 UGT1A10Q9HAW8 530 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 UGT1A8Q9HAW9 530 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ACSS2Q9NR19 701 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 NFKBIL1Q9UBC1 381 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PDE10AQ9Y233 779 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 MRPS7Q9Y2R9 242 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PAPSS2O95340 614 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 IRF9Q00978 393 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 LPIN1Q14693 890 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ZNF792Q3KQV3 632 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SIRPB2Q5JXA9 342 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 FAM124AQ86V42 546 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ZDHHC21Q8IVQ6 265 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 NLGN2Q8NFZ4 835 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ZBED6CLQ96FA7 236 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms