RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MAK16Q9BXY0 300 aaKnown RBP8.72□□□□□ -1.01
TPM3-201ENST00000271850 CHST8Q9H2A9 424 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 TRABDQ9H4I3 376 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 KIR3DX1Q9H7L2 352 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 IMP3Q9NV31 184 aaKnown RBP8.72□□□□□ -1.01
TPM3-201ENST00000271850 LCMT1Q9UIC8 334 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 FKBPLQ9UIM3 349 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 KCND3Q9UK17 655 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 RARRES3Q9UL19 164 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 BTRCQ9Y297 605 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 SEC16AO15027 2179 aa8.72□□□□□ -1.01
TPM3-201ENST00000271850 DOPEY1Q5JWR5 2465 aa8.71□□□□□ -1.01
TPM3-201ENST00000271850 OR6C74A6NCV1 312 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 MGAT4DA6NG13 374 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 ARGFXA6NJG6 315 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 H3BMH7 237 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 BTN3A3O00478 584 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 CCL22O00626 93 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 AKR1B10O60218 316 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 KCNJ13O60928 360 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 SEMA7AO75326 666 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 CEACAM4O75871 244 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 PRAMEF1O95521 474 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 CTSBP07858 339 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 BMP2P12643 396 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 HLA-DPA1P20036 260 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 RBL1P28749 1068 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 NR2C2P49116 596 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 CDKN1CP49918 316 aaPredicted RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 ZNF140P52738 457 aaPredicted RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 ITGA1P56199 1179 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 FOXL2P58012 376 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 TUBB4BP68371 445 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 TBX2Q13207 712 aaPredicted RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 TUBB2AQ13885 445 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 GTF2H3Q13889 308 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 PPP2R5EQ16537 467 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 BCL7AQ4VC05 210 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 DNTTIP2Q5QJE6 756 aaKnown RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 IZUMO3Q5VZ72 239 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 ZNF385CQ66K41 422 aaPredicted RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 RANBP10Q6VN20 620 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 KMT5CQ86Y97 462 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 RHOT2Q8IXI1 618 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 DSELQ8IZU8 1212 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 TEX19Q8NA77 164 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 OR4K2Q8NGD2 314 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 OR13C4Q8NGS5 318 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 OR2L2Q8NH16 312 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 OR1L3Q8NH93 324 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 LINC00615Q96LM1 132 aaPredicted RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 C12orf66Q96MD2 445 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 FCRL4Q96PJ5 515 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 APOL2Q9BQE5 337 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 TUBB2BQ9BVA1 445 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 FICDQ9BVA6 458 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 NUDT9Q9BW91 350 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 TLR10Q9BXR5 811 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 PDE7BQ9NP56 450 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 PCMTD2Q9NV79 361 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 HRASLS2Q9NWW9 162 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 DDX56Q9NY93 547 aaKnown RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 LUZP4Q9P127 313 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 KLHL8Q9P2G9 620 aaPredicted RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 FAM8A1Q9UBU6 413 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.71□□□□□ -1.021e-10■■■□□ 17.4
TPM3-201ENST00000271850 ALG6Q9Y672 507 aa8.71□□□□□ -1.02
TPM3-201ENST00000271850 DNMT3AQ9Y6K1 912 aaPredicted RBP8.71□□□□□ -1.02
TPM3-201ENST00000271850 SLC9B1P1A6NJY1 282 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 MASP2O00187 686 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 BTN3A1O00481 513 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 PSTPIP1O43586 416 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 CPNE3O75131 537 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 CNOT3O75175 753 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 SCRG1O75711 98 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 SRP72O76094 671 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 MT-ND3P03897 115 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 TPBGLP0DKB5 382 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 ST6GAL1P15907 406 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 VCLP18206 1134 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 POLR2CP19387 275 aaPredicted RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 LPOP22079 712 aaPredicted RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 PSMB4P28070 264 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 PDHA2P29803 388 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 HALP42357 657 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 SLC1A1P43005 524 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 PRLHRP49683 370 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 HADHBP55084 474 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 HSD11B2P80365 405 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 ACY1Q03154 408 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 MPP3Q13368 585 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 PLCL1Q15111 1095 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 TFDP3Q5H9I0 405 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 AADACL2Q6P093 401 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 BBS12Q6ZW61 710 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 PID1Q7Z2X4 250 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 SYVN1Q86TM6 617 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 KLHDC8BQ8IXV7 354 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 KATNAL2Q8IYT4 538 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 ZBTB2Q8N680 514 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms