RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 CRY1Q16526 586 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 FGD3Q5JSP0 725 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 PRSS55Q6UWB4 352 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 RPS27LQ71UM5 84 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SVOPLQ8N434 492 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 CARNMT1Q8N4J0 409 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 TMBIM1Q969X1 311 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 MTFMTQ96DP5 389 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 TBATAQ96M53 351 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 CASD1Q96PB1 797 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 HBEGFQ99075 208 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SLC29A1Q99808 456 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 OCEL1Q9H607 264 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 DNAJB9Q9UBS3 223 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 GNG14A0A1W2PPG7 69 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SYNDIG1LA6NDD5 238 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 H0Y858 1186 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 CLDN11O75508 207 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SYN1P17600 705 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 RPL34P49207 117 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 GRM2Q14416 872 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 STEAP4Q687X5 459 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 METTL3Q86U44 580 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SLC22A16Q86VW1 577 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 HS6ST3Q8IZP7 471 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 OR10A6Q8NH74 314 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SELENOMQ8WWX9 145 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 MUS81Q96NY9 551 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 ASAH2Q9NR71 780 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 SH3BP4Q9P0V3 963 aa11.37□□□□□ -0.59
CLSTN3-201ENST00000266546 PRORSD1PA6NEY8 169 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 SOCS2O14508 198 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TMCC2O75069 709 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 SNAP29O95721 258 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 GLUD1P00367 558 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TIMP1P01033 207 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 RXRGP48443 463 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 PITX1P78337 314 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 MED22Q15528 200 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TAZQ16635 292 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 PPP1R3AQ16821 1122 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 RABL3Q5HYI8 236 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TXNDC5Q8NBS9 432 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 MZB1Q8WU39 189 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ITPKCQ96DU7 683 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 KLHL32Q96NJ5 620 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 FCRL3Q96P31 734 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ANKRD60Q9BZ19 345 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 GPR62Q9BZJ7 368 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 RIMS3Q9UJD0 308 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 DOCK3Q8IZD9 2030 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ACSL4O60488 711 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 SIX3O95343 332 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ABCB1P08183 1280 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 CDH1P12830 882 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 IL7RP16871 459 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 HOXB6P17509 224 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 MLLT6P55198 1093 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 SYTL3Q4VX76 610 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 DGKKQ5KSL6 1271 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ZCCHC8Q6NZY4 707 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TTC23LQ6PF05 361 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 LIMS2Q7Z4I7 341 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 HJURPQ8NCD3 748 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 RTP4Q96DX8 246 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 C1orf74Q96LT6 269 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 MLPHQ9BV36 600 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 FAM126AQ9BYI3 521 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 CXCL16Q9H2A7 254 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 MARCH7Q9H992 704 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 UBA2Q9UBT2 640 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 H3BN98 237 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 PGLSO95336 258 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 NTRK1P04629 796 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 UROSP10746 265 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 GLDCP23378 1020 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 CHRNA4P43681 627 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 HERVK_113P63132 956 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 OLR1P78380 273 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TXNL4AP83876 142 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 SLC10A2Q12908 348 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 NFATC3Q12968 1075 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TSTD2Q5T7W7 516 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 R3HCC1LQ7Z5L2 792 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 C11orf74Q86VG3 221 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ARMC8Q8IUR7 673 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 DEPDC4Q8N2C3 294 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ANKFN1Q8N957 763 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 LINGO1Q96FE5 620 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 TUBA1CQ9BQE3 449 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 ERVK-6Q9BXR3 956 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 IL23AQ9NPF7 189 aa11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 H2AFY2Q9P0M6 372 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 SAMD4AQ9UPU9 718 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-201ENST00000266546 SNTNA6NMZ2 147 aa11.35□□□□□ -0.59
CLSTN3-201ENST00000266546 EFCAB9A8MZ26 197 aa11.35□□□□□ -0.59
CLSTN3-201ENST00000266546 TACR2P21452 398 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms