RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 NUDT1P36639 197 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC26A3P40879 764 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 RACK1P63244 317 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 ACAP2Q15057 778 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 LPAL2Q16609 132 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TSNAXIP1Q2TAA8 658 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 FBXO48Q5FWF7 155 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 PLEKHS1Q5SXH7 462 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 PMS2CLQ68D20 193 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 KLC3Q6P597 504 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 CEP68Q76N32 757 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 MFSD2AQ8NA29 543 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 DNASE2BQ8WZ79 361 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 NELL1Q92832 810 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TMEM159Q96B96 161 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 LINC00615Q96LM1 132 aaPredicted RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 OSGEPL1Q9H4B0 414 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 GPR27Q9NS67 375 aa9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 INTS9Q9NV88 658 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 UTP6Q9NYH9 597 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-201ENST00000263694 TMEM131Q92545 1883 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 ZNF318Q5VUA4 2279 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 WDFY4Q6ZS81 3184 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 C17orf113A0A1B0GUU1 675 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 LRRC14BA6NHZ5 514 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 UBXN8O00124 270 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 TLR4O00206 839 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 KPNA5O15131 536 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 BCAT2O15382 392 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 DLX3O60479 287 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 SNX2O60749 519 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 EML2O95834 649 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CELA2BP08218 269 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 DHRS4L1P0CG22 281 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CPA3P15088 417 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 KELP23276 732 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 ALDH3A1P30838 453 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 MDH1P40925 334 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 SERPINB4P48594 390 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 RGS4P49798 205 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 HK3P52790 923 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC18A1P54219 525 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CTBSQ01459 385 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 C1orf61Q13536 156 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 PCLAFQ15004 111 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 PHKG1Q16816 387 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 C18orf21Q32NC0 220 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 TTLL9Q3SXZ7 439 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CCDC153Q494R4 210 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 WDR45BQ5MNZ6 344 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CES4AQ5XG92 561 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 LYSMD4Q5XG99 296 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 MBOAT1Q6ZNC8 495 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 RPS27LQ71UM5 84 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CCDC91Q7Z6B0 441 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 C10orf107Q8IVU9 208 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC22A15Q8IZD6 547 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 MYO1HQ8N1T3 1032 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 OXR1Q8N573 874 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 ARFGAP2Q8N6H7 521 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 PHC3Q8NDX5 983 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 HM13Q8TCT9 377 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 KIAA1191Q96A73 305 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 PDLIM5Q96HC4 596 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 OR2M4Q96R27 311 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 ATOH8Q96SQ7 321 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 NRTNQ99748 197 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 MRPL57Q9BQC6 102 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 WWP1Q9H0M0 922 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 TFB2MQ9H5Q4 396 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CNOT10Q9H9A5 744 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 FSCN3Q9NQT6 498 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 PRDM8Q9NQV8 689 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 ZSCAN32Q9NX65 697 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 KLHL42Q9P2K6 505 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 RNF112Q9ULX5 631 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 WDR37Q9Y2I8 494 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 CFAP20Q9Y6A4 193 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 DNMT3AQ9Y6K1 912 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 DNAH14Q0VDD8 3507 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 ADAMTS9Q9P2N4 1935 aa9.53□□□□□ -0.88
SNRNP40-201ENST00000263694 DMDP11532 3685 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 TRBV23OR9-2A0A075B6M9 112 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 A0A1B0GVT2 93 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 GPR89AB7ZAQ6 455 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 F8W8V4 182 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 H3BM21 787 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 TNFRSF10CO14798 259 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 LIN7AO14910 233 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 GUCA1CO95843 209 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 BPGMP07738 259 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 RBP1P09455 135 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 GPR89BP0CG08 455 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 CBSLP0DN79 551 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 MTHFD2P13995 350 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 BGNP21810 368 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 CBSP35520 551 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 BDKRB1P46663 353 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms