RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 VAC14Q08AM6 782 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 SPCS2Q15005 226 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 SF1Q15637 639 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 NFE2Q16621 373 aaPredicted RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 TYSND1Q2T9J0 566 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 FAM98BQ52LJ0 330 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 XKR7Q5GH72 579 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 RTP2Q5QGT7 225 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 GRAMD4Q6IC98 578 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 SULT1C3Q6IMI6 304 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 RASAL3Q86YV0 1011 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 LIX1Q8N485 282 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 PACRGLQ8N7B6 248 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 DDHD1Q8NEL9 900 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 STON2Q8WXE9 905 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 PYCR2Q96C36 320 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 EID2BQ96D98 161 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 ZNF583Q96ND8 569 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 AMBRA1Q9C0C7 1298 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 TRNAU1APQ9NX07 287 aaKnown RBP8.98□□□□□ -0.97
MSH4-201ENST00000263187 ELOVL2Q9NXB9 296 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 PRSS21Q9Y6M0 314 aa8.98□□□□□ -0.97
MSH4-201ENST00000263187 IGLV3-10A0A075B6K4 115 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 AGRPO00253 132 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 DEAF1O75398 565 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 FTH1P02794 183 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 FUCA1P04066 466 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 OGNP20774 298 aaKnown RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 FMO3P31513 532 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 HTR7P34969 479 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 MAP2K4P45985 399 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 SUOXP51687 545 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 PLA2G16P53816 162 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ACVR1Q04771 509 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 KCNAB2Q13303 367 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 DAG1Q14118 895 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ARHGEF7Q14155 803 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 CARTPTQ16568 116 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 MAPKAPK3Q16644 382 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 CYP2A13Q16696 494 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 PGS1Q32NB8 556 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 CENPSQ8N2Z9 138 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 NKAPQ8N5F7 415 aaKnown RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 TMCO5AQ8N6Q1 288 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 GPR150Q8NGU9 434 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 TSSK3Q96PN8 268 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ZIC5Q96T25 663 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 PDFQ9HBH1 243 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 PNMA8BQ9ULN7 279 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 MYO16Q9Y6X6 1858 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 LSM1O15116 133 aaKnown RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 ALPLP05186 524 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 FLT3LGP49771 235 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 RAD23AP54725 363 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 IL5RAQ01344 420 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 DSC3Q14574 896 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 MAPK11Q15759 364 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 EGFLAMQ63HQ2 1017 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 FAM117BQ6P1L5 589 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 UBE2FQ969M7 185 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 SLC47A1Q96FL8 570 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ACTR8Q9H981 624 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 WWOXQ9NZC7 414 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 FBXO10Q9UK96 956 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 SLC45A1Q9Y2W3 748 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 A0A0C4DFX4 3053 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 MTMR11A4FU01 709 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 DRGXA6NNA5 263 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 FFAR2O15552 330 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 SLC25A14O95258 325 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 ENO2P09104 434 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 CDH1P12830 882 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 TYMPP19971 482 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 DCKP27707 260 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 CORO1AP31146 461 aaKnown RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 MAGEA10P43363 369 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 RXRGP48443 463 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 HLCSP50747 726 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ALDH3A2P51648 485 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 EEFSECP57772 596 aaKnown RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 CD47Q08722 323 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ZNF177Q13360 481 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 MBTPS1Q14703 1052 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 TAF1AQ15573 450 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 XAF1Q6GPH4 301 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 BEND5Q7L4P6 421 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 THAP5Q7Z6K1 395 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 COLGALT2Q8IYK4 626 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 C8orf59Q8N0T1 100 aaPredicted RBP8.97□□□□□ -0.97
MSH4-201ENST00000263187 SCML4Q8N228 414 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 LINC01599Q8WXQ3 324 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 TADA1Q96BN2 335 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ULK4Q96C45 1275 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 INPP5KQ9BT40 448 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 DPY30Q9C005 99 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 RIBC2Q9H4K1 309 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 POLE4Q9NR33 117 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 COMMD8Q9NX08 183 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 ZNF490Q9ULM2 529 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms