RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 S100A14Q9HCY8 104 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 ZDHHC3Q9NYG2 299 aa13.34□□□□□ -0.27
VMP1-201ENST00000262291 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 OR7A17O14581 309 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 INPP4BO15327 924 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 ESRRBO95718 433 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 SNRPB2P08579 225 aaKnown RBP13.33□□□□□ -0.27
VMP1-201ENST00000262291 GPX3P22352 226 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 RPS3P23396 243 aaKnown RBP eCLIP13.33□□□□□ -0.274e-6■■■■□ 22.6
VMP1-201ENST00000262291 NNMTP40261 264 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 RGS4P49798 205 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 STX1BP61266 288 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 PSME3P61289 254 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 GTF2H2Q13888 395 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 RPS6KA2Q15349 733 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 GTF2H2CQ6P1K8 395 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 RETREG3Q86VR2 466 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 OR4F6Q8NGB9 312 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 MTFMTQ96DP5 389 aaKnown RBP13.33□□□□□ -0.27
VMP1-201ENST00000262291 ZNF641Q96N77 438 aaPredicted RBP13.33□□□□□ -0.27
VMP1-201ENST00000262291 LYSMD1Q96S90 227 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 CACNA2D2Q9NY47 1150 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 WWOXQ9NZC7 414 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 NUDT4Q9NZJ9 180 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 ATG2BQ96BY7 2078 aa13.33□□□□□ -0.27
VMP1-201ENST00000262291 SPTBN5Q9NRC6 3674 aaKnown RBP13.33□□□□□ -0.27
VMP1-201ENST00000262291 EPOPA6NHQ4 379 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 ZNF197O14709 1029 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 MRASO14807 208 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 CISD3P0C7P0 127 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 DGKAP23743 735 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 HOXA9P31269 272 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 MRPS22P82650 360 aaKnown RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 UBE3AQ05086 875 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 PTK2BQ14289 1009 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 CAPRIN1Q14444 709 aaKnown RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 SFT2D3Q587I9 215 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 MACC1Q6ZN28 852 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 NPAS3Q8IXF0 933 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 METTL6Q8TCB7 284 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 PPP2R3CQ969Q6 453 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 VPS33AQ96AX1 596 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 HTATIP2Q9BUP3 242 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 FAM126AQ9BYI3 521 aaPredicted RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 IPPKQ9H8X2 491 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 FARSBQ9NSD9 589 aaKnown RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 IL36AQ9UHA7 158 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 PCDHGA7Q9Y5G6 932 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 PLXNB3Q9ULL4 1909 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 TMEM202A6NGA9 273 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 RAD51BO15315 384 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 DNAJA2O60884 412 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 VARSP26640 1264 aaKnown RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 CASP2P42575 452 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 NSG1P42857 185 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 AP2B1P63010 937 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 HERC3Q15034 1050 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 GPR33Q49SQ1 333 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 PIGGQ5H8A4 983 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 IL27RAQ6UWB1 636 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 PGAM4Q8N0Y7 254 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 CBARPQ8N350 705 aaPredicted RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 LILRA3Q8N6C8 439 aaPredicted RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 ZBTB8BQ8NAP8 495 aaPredicted RBP13.33□□□□□ -0.28
VMP1-201ENST00000262291 FGF13Q92913 245 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 PYCR2Q96C36 320 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 SLX1AQ9BQ83 275 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 TMEM79Q9BSE2 394 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 ZDHHC7Q9NXF8 308 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 ZNHIT2Q9UHR6 403 aa13.33□□□□□ -0.28
VMP1-201ENST00000262291 C16orf96A6NNT2 1141 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 FADS2P1A8MWK0 482 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 CDK4P11802 303 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 LBPP18428 481 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 CAPN3P20807 821 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 PBLDP30039 288 aaPredicted RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 AQP4P55087 323 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 PLIN5Q00G26 463 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 MED21Q13503 144 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 GRM2Q14416 872 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 FNDC3BQ53EP0 1204 aaKnown RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 TXNDC11Q6PKC3 985 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 ZNF554Q86TJ5 538 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 BHLHE22Q8NFJ8 381 aaPredicted RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 OSCP1Q8WVF1 389 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 ASB2Q96Q27 587 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 MTIF3Q9H2K0 278 aaKnown RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 FAM83DQ9H4H8 585 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 RWDD3Q9Y3V2 267 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 ANGPTL3Q9Y5C1 460 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 HEMK1Q9Y5R4 338 aaPredicted RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 TMEM221A6NGB7 291 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 VILLO15195 856 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 MLYCDO95822 493 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 UROSP10746 265 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 ATP6V1B1P15313 513 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms