RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PPP1R14CQ8TAE6 165 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 WDR34Q96EX3 536 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PTPN13Q12923 2485 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ARHGAP42A6NI28 874 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 FGF1P05230 155 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 RUNX3Q13761 415 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 DAZAP2Q15038 168 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ADPRMQ3LIE5 342 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 AGBL2Q5U5Z8 902 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 KIRREL3Q8IZU9 778 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 CLEC4FQ8N1N0 589 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 CCHCR1Q8TD31 782 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PANX3Q96QZ0 392 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 SGPP1Q9BX95 441 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 SEMA5BQ9P283 1151 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 FBXO5Q9UKT4 447 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ACTL7BQ9Y614 415 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ACACAQ13085 2346 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 HECTD4Q9Y4D8 3996 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 SCAMP1O15126 338 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PROM1O43490 865 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 GLUD1P00367 558 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PIK3R1P27986 724 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 AVPR1AP37288 418 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 CDH13P55290 713 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 LMNB2Q03252 620 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 SRSF6Q13247 344 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 NFE2L1Q14494 772 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 FCRL6Q6DN72 434 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 MACC1Q6ZN28 852 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ARHGAP24Q8N264 748 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 MICAL1Q8TDZ2 1067 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PPP2R3CQ969Q6 453 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF681Q96N22 645 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 TBL1YQ9BQ87 522 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 TRIM49D1C9J1S8 452 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 E7ENX8 843 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PABPC1P11940 636 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 SKIP12755 728 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 EPHB3P54753 998 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 YBEYP58557 167 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 TMPRSS15P98073 1019 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 TAP2Q03519 686 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 CDK18Q07002 472 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 MARK4Q96L34 752 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PPP1R2P1Q96PQ5 205 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 VPS35Q96QK1 796 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 SMC6Q96SB8 1091 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 RYR3Q15413 4870 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 DFFAO00273 331 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PRPSAP2O60256 369 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 PEX11AO75192 247 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ZWINTO95229 277 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 GAB1Q13480 694 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 CEBPEQ15744 281 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 CRIP3Q6Q6R5 217 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF783Q6ZMS7 281 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 BNC2Q6ZN30 1099 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 FAM43BQ6ZT52 329 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 TRMT10CQ7L0Y3 403 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 DPPA4Q7L190 304 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 KIAA1958Q8N8K9 716 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 RPRD1AQ96P16 312 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 RHNO1Q9BSD3 238 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 SMOC1Q9H4F8 434 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 UBE2ZQ9H832 354 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 STOX2Q9P2F5 926 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 DKK3Q9UBP4 350 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 MAFFQ9ULX9 164 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 MAGED1Q9Y5V3 778 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 RPS6KL1Q9Y6S9 549 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 ABCA4P78363 2273 aa5.49□□□□□ -1.53
TOPBP1-201ENST00000260810 UBOX5O94941 541 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ADRB3P13945 408 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 OXTRP30559 389 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ARL4CP56559 192 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 TGFBIQ15582 683 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 STPG1Q5TH74 334 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF425Q6IV72 752 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 FBXO42Q6P3S6 717 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PPP1R21Q6ZMI0 780 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ZAR1Q86SH2 424 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 METTL23Q86XA0 190 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PTOV1Q86YD1 416 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 RBFAQ8N0V3 343 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF480Q8WV37 535 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF599Q96NL3 588 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CPSF2Q9P2I0 782 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 DUSP12Q9UNI6 340 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PRR5-ARHGAP8B1AHC4 643 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ATP8B1O43520 1251 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 NOL3O60936 208 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CLDN11O75508 207 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 IFNB1P01574 187 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PPM1FP49593 454 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 LIG3P49916 1009 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 GEMIN4P57678 1058 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 RPL10AP62906 217 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ARHGAP8P85298 464 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms