RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ASB11Q8WXH4 323 aa21.92■■□□□ 1.1
SIX3-201ENST00000260653 GABRG3Q99928 467 aa21.92■■□□□ 1.1
SIX3-201ENST00000260653 BTRCQ9Y297 605 aa21.92■■□□□ 1.1
SIX3-201ENST00000260653 MEI4A8MW99 385 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 RNASEH2AO75792 299 aaKnown RBP21.91■■□□□ 1.1
SIX3-201ENST00000260653 PBLDP30039 288 aaPredicted RBP21.91■■□□□ 1.1
SIX3-201ENST00000260653 RPIAP49247 311 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 NAA25Q14CX7 972 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 SULT1C3Q6IMI6 304 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 SLC44A3Q8N4M1 653 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 OR2T3Q8NH03 318 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 RAB3IPQ96QF0 476 aaPredicted RBP21.91■■□□□ 1.1
SIX3-201ENST00000260653 TMEM265A0A087WTH1 108 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 LOC100653049A0A140TA62 436 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 CRCPO75575 148 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 KRT34O76011 436 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 MPC1LP0DKB6 136 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 GTF2H2Q13888 395 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 E2F5Q15329 346 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 GTF2H2CQ6P1K8 395 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 GPRIN3Q6ZVF9 776 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 ADGRG6Q86SQ4 1221 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 NLRP8Q86W28 1048 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 DDIASQ8IXT1 998 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 ZNF382Q96SR6 550 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 ARL15Q9NXU5 204 aa21.91■■□□□ 1.1
SIX3-201ENST00000260653 COPG1Q9Y678 874 aaKnown RBP21.91■■□□□ 1.1
SIX3-201ENST00000260653 KRT87PA6NCN2 255 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 A8MUI8 341 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 AP1G1O43747 822 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 CCNT2O60583 730 aaKnown RBP21.9■■□□□ 1.1
SIX3-201ENST00000260653 SLCO2B1O94956 709 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 OR4F21O95013 312 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 KLF8O95600 359 aaPredicted RBP21.9■■□□□ 1.1
SIX3-201ENST00000260653 C8GP07360 202 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 PREPP48147 710 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 SYTL3Q4VX76 610 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 RALGPS2Q86X27 583 aaPredicted RBP21.9■■□□□ 1.1
SIX3-201ENST00000260653 CPSF7Q8N684 471 aaKnown RBP21.9■■□□□ 1.1
SIX3-201ENST00000260653 LENG8Q96PV6 779 aaPredicted RBP21.9■■□□□ 1.1
SIX3-201ENST00000260653 CCM2Q9BSQ5 444 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 SLC12A9Q9BXP2 914 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 OR7A17O14581 309 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 GIPC1O14908 333 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 PIK3R1P27986 724 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 ARL1P40616 181 aaPredicted RBP21.9■■□□□ 1.1
SIX3-201ENST00000260653 GTF2A1P52655 376 aaPredicted RBP21.9■■□□□ 1.1
SIX3-201ENST00000260653 ERVPABLB-1P60509 514 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 STARD3Q14849 445 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 LETMD1Q6P1Q0 360 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 CD244Q9BZW8 370 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 PARVBQ9HBI1 364 aa21.9■■□□□ 1.1
SIX3-201ENST00000260653 TM7SF2O76062 418 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 ANXA5P08758 320 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 COL9A1P20849 921 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 SDE2Q6IQ49 451 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 CHSY3Q70JA7 882 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 LARP4Q71RC2 724 aaKnown RBP eCLIP21.89■■□□□ 1.1
SIX3-201ENST00000260653 TRAPPC5Q8IUR0 188 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 UBTD2Q8WUN7 234 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 CMTM5Q96DZ9 223 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 ZCCHC2Q9C0B9 1178 aaKnown RBP21.89■■□□□ 1.1
SIX3-201ENST00000260653 TRPV5Q9NQA5 729 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 ATXN10Q9UBB4 475 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 GULP1Q9UBP9 304 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 GIMAP2Q9UG22 337 aa21.89■■□□□ 1.1
SIX3-201ENST00000260653 A0A1W2PQF6 199 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 GFYI3L273 518 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 GSC2O15499 205 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 LILRB5O75023 590 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 ASGR2P07307 311 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 LINC00032P0C843 101 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 HOXB2P14652 356 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 CCDC85BQ15834 202 aaPredicted RBP21.89■■□□□ 1.09
SIX3-201ENST00000260653 CDYL2Q8N8U2 506 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 TMEM159Q96B96 161 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 IPPKQ9H8X2 491 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 OPTCQ9UBM4 332 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 TRIOO75962 3097 aa21.89■■□□□ 1.09
SIX3-201ENST00000260653 ZFC3H1O60293 1989 aaKnown RBP21.89■■□□□ 1.09
SIX3-201ENST00000260653 MBTPS2O43462 519 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 PCCBP05166 539 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 ENO2P09104 434 aaPredicted RBP21.88■■□□□ 1.09
SIX3-201ENST00000260653 COX4I1P13073 169 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 MXRA7P84157 204 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 NEK10Q6ZWH5 1172 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 TMPRSS6Q8IU80 811 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 GANCQ8TET4 914 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 GAS2L1Q99501 681 aaPredicted RBP21.88■■□□□ 1.09
SIX3-201ENST00000260653 RASSF4Q9H2L5 321 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 AKTIPQ9H8T0 292 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 TRIM39Q9HCM9 518 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 FBXL12Q9NXK8 326 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 UROSP10746 265 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 PKNOX1P55347 436 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 SP140Q13342 867 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 ZXDCQ2QGD7 858 aaPredicted RBP21.88■■□□□ 1.09
SIX3-201ENST00000260653 WSCD2Q2TBF2 565 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 TCHHL1Q5QJ38 904 aaPredicted RBP21.88■■□□□ 1.09
SIX3-201ENST00000260653 FOXJ1Q92949 421 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms