RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 FAM221BA6H8Z2 402 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 TP73O15350 636 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 OR1I1O60431 355 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 USP1O94782 785 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 JUPP14923 745 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 TTPAP49638 278 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 SPRED3Q2MJR0 410 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 METRNLQ641Q3 311 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 FAM83HQ6ZRV2 1179 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 ZNF438Q7Z4V0 828 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 LDB1Q86U70 411 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 SLC9B2Q86UD5 537 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 CCDC25Q86WR0 208 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 LRRC34Q8IZ02 419 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 Q8N9G6 341 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 BBOF1Q8ND07 529 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 WDR48Q8TAF3 677 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 CCM2Q9BSQ5 444 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 VPS37BQ9H9H4 285 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 SARS2Q9NP81 518 aaKnown RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 SCHIP1Q9P0W5 487 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 PRSS21Q9Y6M0 314 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 QSOX1O00391 747 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 POLBP06746 335 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 BRAFP15056 766 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 XRCC1P18887 633 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 HHEXQ03014 270 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 MSS51Q4VC12 460 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 MRNIPQ6NTE8 343 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 SDCCAG8Q86SQ7 713 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 CFAP206Q8IYR0 622 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 UHMK1Q8TAS1 419 aaKnown RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 TACO1Q9BSH4 297 aaKnown RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 CPNE7Q9UBL6 633 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 CLCA2Q9UQC9 943 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 NEUROG3Q9Y4Z2 214 aa16.43■□□□□ 0.22
SDCBP-201ENST00000260130 ARHGEF17Q96PE2 2063 aaPredicted RBP16.43■□□□□ 0.22
SDCBP-201ENST00000260130 ZCWPW2A0A1B0GU75 182 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 GOLGA8TH3BQL2 631 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CASC3O15234 703 aaKnown RBP16.42■□□□□ 0.22
SDCBP-201ENST00000260130 MT-CO3P00414 261 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 VIMP08670 466 aaKnown RBP16.42■□□□□ 0.22
SDCBP-201ENST00000260130 HALP42357 657 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 GPR3P46089 330 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 SLCO1A2P46721 670 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CCL7P80098 99 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CAV1Q03135 178 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 NR1D2Q14995 579 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 BBS9Q3SYG4 887 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CDCP2Q5VXM1 449 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 SPRED1Q7Z699 444 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CCNJLQ8IV13 435 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CACTIN-AS1Q8N1I8 211 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 AVL9Q8NBF6 648 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 HM13Q8TCT9 377 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 MAGEC3Q8TD91 643 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 PWWP2AQ96N64 755 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 EBNA1BP2Q99848 306 aaKnown RBP16.42■□□□□ 0.22
SDCBP-201ENST00000260130 NAT9Q9BTE0 207 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 CDC42EP4Q9H3Q1 356 aaKnown RBP16.42■□□□□ 0.22
SDCBP-201ENST00000260130 STN1Q9H668 368 aaKnown RBP16.42■□□□□ 0.22
SDCBP-201ENST00000260130 FAM8A1Q9UBU6 413 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 ACSL5Q9ULC5 683 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 WDR37Q9Y2I8 494 aa16.42■□□□□ 0.22
SDCBP-201ENST00000260130 FAM149AA5PLN7 773 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 ZW10O43264 779 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 BANF1O75531 89 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 GSTM1P09488 218 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 OR56A5P0C7T3 313 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 PGAM1P18669 254 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 ALDH4A1P30038 563 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 ARL4CP56559 192 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 GSTM4Q03013 218 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 CLCA4Q14CN2 919 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 HIF1AQ16665 826 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 NEPROQ6NW34 567 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 GPR150Q8NGU9 434 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 LRRN3Q9H3W5 708 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 ZNF624Q9P2J8 865 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-201ENST00000260130 A0A1W2PQM1 296 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 NTN3O00634 580 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-201ENST00000260130 B4GAT1O43505 415 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 NDUFS3O75489 264 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 TCEA3O75764 348 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 RPLP0P05388 317 aaKnown RBP16.41■□□□□ 0.22
SDCBP-201ENST00000260130 SLC19A1P41440 591 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 OR1D5P58170 312 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 UBE2IP63279 158 aaKnown RBP16.41■□□□□ 0.22
SDCBP-201ENST00000260130 XKR5Q6UX68 686 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 MARCH9Q86YJ5 346 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 DCBLD1Q8N8Z6 715 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 SH3KBP1Q96B97 665 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 TCF12Q99081 682 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 SLC38A3Q99624 504 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 ELAC2Q9BQ52 826 aaKnown RBP16.41■□□□□ 0.22
SDCBP-201ENST00000260130 SYNDIG1Q9H7V2 258 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 IL1RAPL1Q9NZN1 696 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 PSMD13Q9UNM6 376 aa16.41■□□□□ 0.22
SDCBP-201ENST00000260130 MSRB2Q9Y3D2 182 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms