RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ARRB1P49407 418 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 IL2P60568 153 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 PLOD1Q02809 727 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 DLG1Q12959 904 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 BNIP3Q12983 259 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 RPA4Q13156 261 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 PIWIL4Q7Z3Z4 852 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 EXOC3L1Q86VI1 746 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 SLC22A15Q8IZD6 547 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 CENPLQ8N0S6 344 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 C4orf33Q8N1A6 199 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 PLD6Q8N2A8 252 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ACMSDQ8TDX5 336 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 KCTD4Q8WVF5 259 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ZDHHC5Q9C0B5 715 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 OR52A5Q9H2C5 316 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ACBD3Q9H3P7 528 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 DPEP2Q9H4A9 486 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 GAREM1Q9H706 876 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 PRDM8Q9NQV8 689 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 UCKL1Q9NWZ5 548 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 SPASTQ9UBP0 616 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 GMEB2Q9UKD1 530 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 PSMD13Q9UNM6 376 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 WDR37Q9Y2I8 494 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ADAMTS9Q9P2N4 1935 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 WDR87Q6ZQQ6 2873 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 A0A087X1B8 175 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 AQP9O43315 295 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 OPA1O60313 960 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 SNX2O60749 519 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 SYF2O95926 243 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 CBSLP0DN79 551 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 BRAFP15056 766 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 CREB1P16220 341 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 ENGP17813 658 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 IDSP22304 550 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 ATP5DP30049 168 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 CBSP35520 551 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 IL9RQ01113 521 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 CSHL1Q14406 222 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 ELOCQ15369 112 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 TTMPQ5BVD1 217 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 IL27RAQ6UWB1 636 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 CYHR1Q6ZMK1 362 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 TAF8Q7Z7C8 310 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 CLEC14AQ86T13 490 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 TBC1D1Q86TI0 1168 aaPredicted RBP15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 NKAPQ8N5F7 415 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 CABS1Q96KC9 395 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 IGSF5Q9NSI5 407 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 TAAR2Q9P1P5 351 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 IKZF3Q9UKT9 509 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 ACSL5Q9ULC5 683 aa15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 NOVA2Q9UNW9 492 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 RUVBL2Q9Y230 463 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-201ENST00000260054 ZFC3H1O60293 1989 aaKnown RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 A6NCN8 305 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 EIF3FO00303 357 aaPredicted RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 LMNAP02545 664 aaKnown RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 SYPP08247 313 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 ENO3P13929 434 aaPredicted RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 EPHA8P29322 1005 aaPredicted RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 SLC26A3P40879 764 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 RGS4P49798 205 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 SLC18A2Q05940 514 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 CCDC91Q7Z6B0 441 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 FSTL5Q8N475 847 aaPredicted RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 NXNL1Q96CM4 212 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 TLCD1Q96CP7 247 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 PDLIM5Q96HC4 596 aaKnown RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 RMDN2Q96LZ7 410 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 GTPBP2Q9BX10 602 aaKnown RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 WWP1Q9H0M0 922 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 ZNF358Q9NW07 568 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 SCHIP1Q9P0W5 487 aaPredicted RBP15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 CABIN1Q9Y6J0 2220 aa15.46■□□□□ 0.07
CCDC90B-201ENST00000260054 OTOGLQ3ZCN5 2332 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 LNP1A1A4G5 178 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 PDZK1P1A8MUH7 402 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 YY2O15391 372 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 CER1O95813 267 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 LTA4HP09960 611 aaKnown RBP15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 SLC35G4P0C7Q5 338 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 ZNF806P0C7X5 589 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 CD1DP15813 335 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 ACADLP28330 430 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 GABPB1Q06547 395 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 CLCA4Q14CN2 919 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 SF3A2Q15428 464 aaKnown RBP15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 AGBL2Q5U5Z8 902 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 ABRAXAS1Q6UWZ7 409 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 CDHR3Q6ZTQ4 885 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 NEK10Q6ZWH5 1172 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 PDZD3Q86UT5 571 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 SFTPA2Q8IWL1 248 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 MYO1HQ8N1T3 1032 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 SLC25A45Q8N413 288 aa15.45■□□□□ 0.06
CCDC90B-201ENST00000260054 GOLGA6L1Q8N7Z2 621 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms