RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 TXNDC11Q6PKC3 985 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 TMEM179BQ7Z7N9 219 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SIMC1Q8NDZ2 872 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 IPCEF1Q8WWN9 437 aaPredicted RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 ITPAQ9BY32 194 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 NXF2Q9GZY0 626 aaKnown RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 GJD2Q9UKL4 321 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 AP3M1Q9Y2T2 418 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 PNMA8CA0A1B0GUJ8 204 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 CXCR6O00574 342 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 MFN2O95140 757 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 TXNP10599 105 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 IL1RNP18510 177 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 ARSDP51689 593 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 ZNF280AP59817 542 aaPredicted RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 MRPS15P82914 257 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 RAB41Q5JT25 222 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 MRNIPQ6NTE8 343 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 SHQ1Q6PI26 577 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 GDPD3Q7L5L3 318 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 PARP16Q8N5Y8 322 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 OR56A4Q8NGH8 313 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 EDEM1Q92611 657 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 SH3GL1Q99961 368 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 DERL2Q9GZP9 239 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 MKLN1Q9UL63 735 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 NEU3Q9UQ49 428 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 ZW10O43264 779 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 AIREO43918 545 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 FAM20BO75063 409 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 RECQL4O94761 1208 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 GLP2RO95838 553 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 ALOX12P18054 663 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 MZF1P28698 734 aaPredicted RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 GTF2E2P29084 291 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 HOXD11P31277 338 aaPredicted RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 PPP3CCP48454 512 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 SCNN1GP51170 649 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 PPP1R8Q12972 351 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 CDK10Q15131 360 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 RBBP7Q16576 425 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 HABP4Q5JVS0 413 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 ATAD3CQ5T2N8 411 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 SCIMPQ6UWF3 145 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 GPR150Q8NGU9 434 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 OR10A6Q8NH74 314 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 THUMPD3Q9BV44 507 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 GABARAPL1Q9H0R8 117 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 ZBTB20Q9HC78 741 aaPredicted RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 DCAF13Q9NV06 445 aaKnown RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 EVLQ9UI08 416 aaPredicted RBP11.32□□□□□ -0.6
TROAP-201ENST00000257909 FBXO10Q9UK96 956 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 UTS2RQ9UKP6 389 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 GMPPBQ9Y5P6 360 aa11.32□□□□□ -0.6
TROAP-201ENST00000257909 POLR2AP24928 1970 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 CENPXA8MT69 81 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 RECQL5O94762 991 aaPredicted RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 HOXD8P13378 290 aaPredicted RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 PFKLP17858 780 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 PRDX3P30048 256 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 HOXC13P31276 330 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 TGFBR1P36897 503 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 HTR3AP46098 478 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 ARHGDIAP52565 204 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 OR2B6P58173 313 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 GNG2P59768 71 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 CYP4F3Q08477 520 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 GPR149Q86SP6 731 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 DPP9Q86TI2 863 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 SYTL1Q8IYJ3 562 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 TRIM63Q969Q1 353 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 IMP4Q96G21 291 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 PDLIM5Q96HC4 596 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 MED30Q96HR3 178 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 SIK2Q9H0K1 926 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 DDX28Q9NUL7 540 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 OSER1Q9NX31 292 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 CCDC59Q9P031 241 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 VAPAQ9P0L0 249 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 CRNNQ9UBG3 495 aaPredicted RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 RAPGEFL1Q9UHV5 662 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 ZNF225Q9UK10 706 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 TMA7Q9Y2S6 64 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 PKP3Q9Y446 797 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 NEUROG3Q9Y4Z2 214 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 PEX16Q9Y5Y5 336 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 SMIM28A0A1B0GU29 152 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 OR51F1A6NGY5 319 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 CD3EAPO15446 510 aaKnown RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 ECI2O75521 394 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 LGALS2P05162 132 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 PRKCAP17252 672 aa11.31□□□□□ -0.6
TROAP-201ENST00000257909 EFNA1P20827 205 aaPredicted RBP11.31□□□□□ -0.6
TROAP-201ENST00000257909 GGT5P36269 586 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms