RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ITPKBP27987 946 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 ADSLP30566 484 aaPredicted RBP13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 LCP2Q13094 533 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 ZNF516Q92618 1163 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 REEP1Q9H902 201 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 TRIM39Q9HCM9 518 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 SIX4Q9UIU6 781 aa13.21□□□□□ -0.3
PRPF38A-201ENST00000257181 S100GP29377 79 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 TMEM44Q2T9K0 475 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 TRPM8Q7Z2W7 1104 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 HIPK4Q8NE63 616 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 NCSTNQ92542 709 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 SP140LQ9H930 580 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 FZD4Q9ULV1 537 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 NPEPPSL1A6NEC2 478 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 FBLP22087 321 aaKnown RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 PLIN5Q00G26 463 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 GTF2H2Q13888 395 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 PRKD1Q15139 912 aaPredicted RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 GTF2H2CQ6P1K8 395 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 NPHS1O60500 1241 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 CSNK2A2P19784 350 aaPredicted RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 FASP25445 335 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 RPS3AP61247 264 aaKnown RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 GRM7Q14831 915 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 HERC3Q15034 1050 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 PM20D1Q6GTS8 502 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 DEPDC4Q8N2C3 294 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 OR9A1PQ8NGU1 263 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 K7EPI3 171 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 TULP3O75386 442 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 THEGLP0DJG4 465 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 CEBPBP17676 345 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC6A2P23975 617 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 CLCNKAP51800 687 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 OC90Q02509 493 aaPredicted RBP13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 ZNF33BQ06732 778 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 MGAT3Q09327 533 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 PIK3R6Q5UE93 754 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC39A4Q6P5W5 647 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 RPLP0P6Q8NHW5 317 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 CD84Q9UIB8 345 aa13.2□□□□□ -0.3
PRPF38A-201ENST00000257181 CLEC3AO75596 197 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 ALOX5P09917 674 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 FUT11Q495W5 492 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 MREGQ8N565 214 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PLA2G15Q8NCC3 412 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 FNDC11Q9BVV2 318 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 FBRSL1Q9HCM7 1045 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 ZNF282Q9UDV7 671 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 FBXW2Q9UKT8 454 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 DCLK1O15075 740 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PDPK1O15530 556 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TRIM3O75382 744 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PLGP00747 810 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SERPINB3P29508 390 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SSTR1P30872 391 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CRHR1P34998 444 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TBL3Q12788 808 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TRIM68Q6AZZ1 485 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 DAZLQ92904 295 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TBATAQ96M53 351 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CAMK1GQ96NX5 476 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 LRMDAQ9H2I8 198 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SAR1AQ9NR31 198 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 ZNF490Q9ULM2 529 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 MAP2K7O14733 419 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SYNGR4O95473 234 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 MT-CYBP00156 380 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PBX1P40424 430 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 UGT2B15P54855 530 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 RPL38P63173 70 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 NFATC2Q13469 925 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 TOP3AQ13472 1001 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 HNRNPA1L2Q32P51 320 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 RFX4Q33E94 735 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 KIAA0319Q5VV43 1072 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 DHFR2Q86XF0 187 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 LSMEM2Q8N112 164 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 CENPTQ96BT3 561 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 PIGVQ9NUD9 493 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 DTLQ9NZJ0 730 aa13.19□□□□□ -0.3
PRPF38A-201ENST00000257181 SAC3D1A6NKF1 404 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms