RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 NVLO15381 856 aaKnown RBP24.47■■□□□ 1.51
LSM7-201ENST00000252622 TOX3O15405 576 aaPredicted RBP24.47■■□□□ 1.51
LSM7-201ENST00000252622 CAPN5O15484 640 aaPredicted RBP24.47■■□□□ 1.51
LSM7-201ENST00000252622 CCL4P13236 92 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 RPS3P23396 243 aaKnown RBP eCLIP24.47■■□□□ 1.511e-6■■■□□ 17.9
LSM7-201ENST00000252622 DHX34Q14147 1143 aaKnown RBP24.47■■□□□ 1.51
LSM7-201ENST00000252622 TYSND1Q2T9J0 566 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 ANKRD20A4Q4UJ75 823 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 SYTL3Q4VX76 610 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 RNF187Q5TA31 235 aaPredicted RBP24.47■■□□□ 1.51
LSM7-201ENST00000252622 IZUMO3Q5VZ72 239 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 LRRC69Q6ZNQ3 347 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 SDCCAG8Q86SQ7 713 aaPredicted RBP24.47■■□□□ 1.51
LSM7-201ENST00000252622 AGGF1Q8N302 714 aaeCLIP24.47■■□□□ 1.515e-7■■■■■ 27.5
LSM7-201ENST00000252622 OTUD6BQ8N6M0 293 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 ZNF669Q96BR6 464 aaPredicted RBP24.47■■□□□ 1.51
LSM7-201ENST00000252622 SIGLEC10Q96LC7 697 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 C9orf72Q96LT7 481 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 P2RY12Q9H244 342 aa24.47■■□□□ 1.51
LSM7-201ENST00000252622 A8MU76 341 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 B4E171 279 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 NDUFS3O75489 264 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 FGF3P11487 239 aaPredicted RBP24.46■■□□□ 1.51
LSM7-201ENST00000252622 OGNP20774 298 aaKnown RBP24.46■■□□□ 1.51
LSM7-201ENST00000252622 SLC5A2P31639 672 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 TSPAN7P41732 249 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 MAPK10P53779 464 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 BOP1Q14137 746 aaKnown RBP24.46■■□□□ 1.51
LSM7-201ENST00000252622 KRT33BQ14525 404 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 ZDHHC12Q96GR4 267 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 FCRL3Q96P31 734 aaPredicted RBP24.46■■□□□ 1.51
LSM7-201ENST00000252622 TGM7Q96PF1 710 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 TCF12Q99081 682 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 TRIM56Q9BRZ2 755 aaKnown RBP24.46■■□□□ 1.51
LSM7-201ENST00000252622 MVB12BQ9H7P6 319 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 KLHL3Q9UH77 587 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 GNPTGQ9UJJ9 305 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 RPS6KL1Q9Y6S9 549 aa24.46■■□□□ 1.51
LSM7-201ENST00000252622 CELSR3Q9NYQ7 3312 aa24.45■■□□□ 1.51
LSM7-201ENST00000252622 SMAPO00193 183 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 PFDN6O15212 129 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 USP1O94782 785 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 TMEM164Q5U3C3 297 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 SYT10Q6XYQ8 523 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 PRSS42Q7Z5A4 293 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 BMPERQ8N8U9 685 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 ACVR1CQ8NER5 493 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 KCNE4Q8WWG9 221 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 JPH3Q8WXH2 748 aaPredicted RBP24.45■■□□□ 1.5
LSM7-201ENST00000252622 TFGQ92734 400 aaPredicted RBP24.45■■□□□ 1.5
LSM7-201ENST00000252622 USP7Q93009 1102 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 PCDHGA3Q9Y5H0 932 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 MAD1L1Q9Y6D9 718 aa24.45■■□□□ 1.5
LSM7-201ENST00000252622 ZCWPW2A0A1B0GU75 182 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 OR5K3A6NET4 321 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 EFCAB7A8K855 629 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 C9orf172C9J069 976 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 GOLGA8KD6RF30 607 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 GOLGA8TH3BQL2 631 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 TTI1O43156 1089 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 LEPRP48357 1165 aaKnown RBP24.44■■□□□ 1.5
LSM7-201ENST00000252622 MORF4L2Q15014 288 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 NEPROQ6NW34 567 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 OOSP2Q86WS3 158 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 LKAAEAR1Q8TD35 194 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 LPGAT1Q92604 370 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 STAMBPL1Q96FJ0 436 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 PANX3Q96QZ0 392 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 TAAR9Q96RI9 348 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 FERD3LQ96RJ6 166 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 TRIM51Q9BSJ1 452 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 DDA1Q9BW61 102 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 DPH1Q9BZG8 443 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 OCIAD1Q9NX40 245 aa24.44■■□□□ 1.5
LSM7-201ENST00000252622 PRAMEF10O60809 474 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 ITGB6P18564 788 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 CD82P27701 267 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 ACADLP28330 430 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 CCR7P32248 378 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 ABCG1P45844 678 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 ADARP55265 1226 aaKnown RBP24.43■■□□□ 1.5
LSM7-201ENST00000252622 RAB15P59190 212 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 DNAJC21Q5F1R6 531 aaKnown RBP24.43■■□□□ 1.5
LSM7-201ENST00000252622 PTRHD1Q6GMV3 140 aaKnown RBP24.43■■□□□ 1.5
LSM7-201ENST00000252622 IRGCQ6NXR0 463 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 FAM129CQ86XR2 697 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 CILP2Q8IUL8 1156 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 SPACA3Q8IXA5 215 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 ASZ1Q8WWH4 475 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 KRT12Q99456 494 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 ZNF768Q9H5H4 540 aaKnown RBP24.43■■□□□ 1.5
LSM7-201ENST00000252622 SEMA5BQ9P283 1151 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 VPS9D1Q9Y2B5 631 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 LAMA5O15230 3695 aa24.43■■□□□ 1.5
LSM7-201ENST00000252622 UBA6A0AVT1 1052 aaPredicted RBP24.42■■□□□ 1.5
LSM7-201ENST00000252622 IQCF5A8MTL0 148 aa24.42■■□□□ 1.5
LSM7-201ENST00000252622 BHMG1C9JSJ3 638 aaPredicted RBP24.42■■□□□ 1.5
LSM7-201ENST00000252622 GPC4O75487 556 aa24.42■■□□□ 1.5
LSM7-201ENST00000252622 PGAM1P18669 254 aa24.42■■□□□ 1.5
LSM7-201ENST00000252622 AOAHP28039 575 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms