RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RNF11Q9Y3C5 154 aa21.28■■□□□ 1
CLN6-201ENST00000249806 IRAK3Q9Y616 596 aa21.28■■□□□ 1
CLN6-201ENST00000249806 FAM234BA2RU67 622 aa21.27■■□□□ 1
CLN6-201ENST00000249806 RSL1D1O76021 490 aaKnown RBP21.27■■□□□ 1
CLN6-201ENST00000249806 PTPN2P17706 415 aa21.27■■□□□ 1
CLN6-201ENST00000249806 SPINT3P49223 89 aa21.27■■□□□ 1
CLN6-201ENST00000249806 EMX2Q04743 252 aa21.27■■□□□ 1
CLN6-201ENST00000249806 TTLL9Q3SXZ7 439 aa21.27■■□□□ 1
CLN6-201ENST00000249806 SLC2A7Q6PXP3 512 aa21.27■■□□□ 1
CLN6-201ENST00000249806 MARVELD2Q8N4S9 558 aa21.27■■□□□ 1
CLN6-201ENST00000249806 ZUFSPQ96AP4 578 aa21.27■■□□□ 1
CLN6-201ENST00000249806 ZSWIM3Q96MP5 696 aa21.27■■□□□ 1
CLN6-201ENST00000249806 TRIM54Q9BYV2 358 aa21.27■■□□□ 1
CLN6-201ENST00000249806 HEBP1Q9NRV9 189 aa21.27■■□□□ 1
CLN6-201ENST00000249806 KCTD5Q9NXV2 234 aa21.27■■□□□ 1
CLN6-201ENST00000249806 CCL27Q9Y4X3 112 aa21.27■■□□□ 1
CLN6-201ENST00000249806 CXorf51AA0A1B0GTR3 108 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 LOC730098B7Z3J9 87 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 CHN2P52757 468 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 EPHA5P54756 1037 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 FOXM1Q08050 763 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 PRKG2Q13237 762 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 CYP20A1Q6UW02 462 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 GDPD4Q6W3E5 623 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 CYB5D2Q8WUJ1 264 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 CNBD2Q96M20 576 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 CEP44Q9C0F1 390 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 AURKCQ9UQB9 309 aa21.27■□□□□ 0.99
CLN6-201ENST00000249806 POLR3HQ9Y535 204 aaPredicted RBP21.27■□□□□ 0.99
CLN6-201ENST00000249806 ZFC3H1O60293 1989 aaKnown RBP21.26■□□□□ 0.99
CLN6-201ENST00000249806 C15orf38-AP3S2A0A0A6YYH1 394 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 K7EPI3 171 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 MTX2O75431 263 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 FGBP02675 491 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 PIM1P11309 404 aaPredicted RBP21.26■□□□□ 0.99
CLN6-201ENST00000249806 HSPA14Q0VDF9 509 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 GRM2Q14416 872 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 SPRED2Q7Z698 418 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 ARPINQ7Z6K5 226 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 ZFAND4Q86XD8 727 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 ZNF784Q8NCA9 323 aaPredicted RBP21.26■□□□□ 0.99
CLN6-201ENST00000249806 POF1BQ8WVV4 589 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 SCAMP4Q969E2 229 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 CIB1Q99828 191 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 ALG2Q9H553 416 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 KLQ9UEF7 1012 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 SUFUQ9UMX1 484 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 USP22Q9UPT9 525 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 WNT6Q9Y6F9 365 aa21.26■□□□□ 0.99
CLN6-201ENST00000249806 C7orf72A4D263 438 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 EME2A4GXA9 379 aaPredicted RBP21.25■□□□□ 0.99
CLN6-201ENST00000249806 MTHFD1P11586 935 aaKnown RBP21.25■□□□□ 0.99
CLN6-201ENST00000249806 SLC2A4P14672 509 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 WEE1P30291 646 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 RPIAP49247 311 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 GSK3BP49841 420 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 CBX2Q14781 532 aaPredicted RBP21.25■□□□□ 0.99
CLN6-201ENST00000249806 SGO1Q5FBB7 561 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 ZNF697Q5TEC3 545 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 NANOGP8Q6NSW7 305 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 UHRF1Q96T88 793 aaPredicted RBP21.25■□□□□ 0.99
CLN6-201ENST00000249806 SLC29A1Q99808 456 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 EFHD1Q9BUP0 239 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 MTG2Q9H4K7 406 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 PIF1Q9H611 641 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 NANOGQ9H9S0 305 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 RDH14Q9HBH5 336 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 ACTR3BQ9P1U1 418 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 ANKRD28O15084 1053 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 ARPC2O15144 300 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 AKAP10O43572 662 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 CTNNB1P35222 781 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 DGKQP52824 942 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 HMGCS1Q01581 520 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 LIPEQ05469 1076 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 ZXDCQ2QGD7 858 aaPredicted RBP21.25■□□□□ 0.99
CLN6-201ENST00000249806 VRK3Q8IV63 474 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 SKA2Q8WVK7 121 aaPredicted RBP21.25■□□□□ 0.99
CLN6-201ENST00000249806 SPATA16Q9BXB7 569 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 Q9H521 79 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 CCM2LQ9NUG4 571 aaPredicted RBP21.25■□□□□ 0.99
CLN6-201ENST00000249806 ARL15Q9NXU5 204 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 ZNHIT2Q9UHR6 403 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 PDE10AQ9Y233 779 aa21.25■□□□□ 0.99
CLN6-201ENST00000249806 IGLV3-16A0A075B6K0 115 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 STK16O75716 305 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 NCK1P16333 377 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 CKMT2P17540 419 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 RPL38P63173 70 aaKnown RBP21.24■□□□□ 0.99
CLN6-201ENST00000249806 PLIN5Q00G26 463 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 BNIP2Q12982 314 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 CRY1Q16526 586 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 LCN8Q6JVE9 175 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 APLFQ8IW19 511 aaPredicted RBP21.24■□□□□ 0.99
CLN6-201ENST00000249806 MTFMTQ96DP5 389 aaKnown RBP21.24■□□□□ 0.99
CLN6-201ENST00000249806 ARMC1Q9NVT9 282 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 CNOT11Q9UKZ1 510 aaKnown RBP21.24■□□□□ 0.99
CLN6-201ENST00000249806 AQP12BA6NM10 295 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 TTC34A8MYJ7 566 aa21.24■□□□□ 0.99
CLN6-201ENST00000249806 OR56A5P0C7T3 313 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms