RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 FGD3Q5JSP0 725 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ENPP6Q6UWR7 440 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 LRRC8DQ7L1W4 858 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 PEX13Q92968 403 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 WBP2Q969T9 261 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 PPP3R2Q96LZ3 170 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 DOLKQ9UPQ8 538 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ILVBLA1L0T0 632 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ASPDHA6ND91 283 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 UPK3BL1B0FP48 263 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 UPK3BL2E5RIL1 263 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 J3QRK9 145 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 E2F3O00716 465 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ENO2P09104 434 aaPredicted RBP12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ZNF182P17025 639 aaPredicted RBP12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 CSKP41240 450 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 PSMD7P51665 324 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ACVR1Q04771 509 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ELAVL2Q12926 359 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 GRAMD4Q6IC98 578 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ARL14EPQ8N8R7 260 aaPredicted RBP12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 PNPT1Q8TCS8 783 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 AUTS2Q8WXX7 1259 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 FBXL8Q96CD0 374 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 SLC47A1Q96FL8 570 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 ZNF382Q96SR6 550 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 UGT2B28Q9BY64 529 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 VAPAQ9P0L0 249 aa12.4□□□□□ -0.42
RAB3IP-201ENST00000247833 A0A0J9YVX5 310 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 CPSF4O95639 269 aaKnown RBP12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 BCL10O95999 233 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 MYCLP1P12525 358 aaPredicted RBP12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 DGKAP23743 735 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 ARSFP54793 590 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 FOXM1Q08050 763 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 PHKG1Q16816 387 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 SETMARQ53H47 684 aaPredicted RBP12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 PYCR3Q53H96 274 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 ZFAND4Q86XD8 727 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 GIPC3Q8TF64 312 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 TRIB3Q96RU7 358 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 OSBPL6Q9BZF3 934 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 RNF38Q9H0F5 515 aa12.4□□□□□ -0.43
RAB3IP-201ENST00000247833 LOC730098B7Z3J9 87 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ATE1O95260 518 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 HIST1H2AGP0C0S8 130 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 UMPSP11172 480 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 HIST1H2ADP20671 130 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 HALP42357 657 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 GNPDA1P46926 289 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 DGCR6Q14129 220 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 SLC36A3Q495N2 470 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 PDCD4Q53EL6 469 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 OGFOD2Q6N063 350 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 RBFAQ8N0V3 343 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 FAM86B1Q8N7N1 296 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 HIST1H2AHQ96KK5 128 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 HIST1H2AJQ99878 128 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 H2AFJQ9BTM1 129 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 RIBC2Q9H4K1 309 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 PDFQ9HBH1 243 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 LRTM1Q9HBL6 345 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 GNPTGQ9UJJ9 305 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ZNF840PA6NDX5 716 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 S100A3P33764 101 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 SUOXP51687 545 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 C21orf59P57076 290 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 CYP4F3Q08477 520 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 DAG1Q14118 895 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 MEP1AQ16819 746 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 CCNYL2Q5T2Q4 361 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 KLHL35Q6PF15 583 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ITIH5Q86UX2 942 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 SLC22A15Q8IZD6 547 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 CDK5RAP1Q96SZ6 601 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 SEZ6LQ9BYH1 1024 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 TOR3AQ9H497 397 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 RNF186Q9NXI6 227 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 TSC2P49815 1807 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ELOVL7A1L3X0 281 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 DIRAS1O95057 198 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 BMP10O95393 424 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 GALTP07902 379 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 RAP2AP10114 183 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 CDH1P12830 882 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 BMP1P13497 986 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ITPKAP23677 461 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 HRH2P25021 359 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 NAA20P61599 178 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ARF5P84085 180 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 TTLL9Q3SXZ7 439 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 BROXQ5VW32 411 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ANKRD34AQ69YU3 496 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 TXNDC8Q6A555 127 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 MFSD2AQ8NA29 543 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 ERLEC1Q96DZ1 483 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 UHRF1Q96T88 793 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms