RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CXCR6O00574 342 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 AOC2O75106 756 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 CYP7B1O75881 506 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 DPP6P42658 865 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 TJAP1Q5JTD0 557 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 ARL10Q8N8L6 244 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 PIK3C3Q8NEB9 887 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 VANGL1Q8TAA9 524 aaPredicted RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 ROPN1LQ96C74 230 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 NSMCE3Q96MG7 304 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 FAM124BQ9H5Z6 455 aaPredicted RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 PLOD2O00469 737 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 TRBC1P01850 177 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 IGFBP5P24593 272 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 CAPGP40121 348 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 LEPRP48357 1165 aaKnown RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 CDH4P55283 916 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 RUNX1T1Q06455 604 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 MED22Q15528 200 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 SF1Q15637 639 aaKnown RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 PM20D1Q6GTS8 502 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 ERMP1Q7Z2K6 904 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 SPATA19Q7Z5L4 167 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 IFNL1Q8IU54 200 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 CMTR2Q8IYT2 770 aaKnown RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 CLIP4Q8N3C7 705 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 HJURPQ8NCD3 748 aaPredicted RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 OR5AK3PQ8NH89 298 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 MS4A4AQ96JQ5 239 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 TSGA13Q96PP4 275 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 MIR1-1HGQ9H1L0 117 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 TFB2MQ9H5Q4 396 aaKnown RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 PLGRKTQ9HBL7 147 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 FARSBQ9NSD9 589 aaKnown RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 SPG21Q9NZD8 308 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 IKZF3Q9UKT9 509 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 SHROOM3Q8TF72 1996 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 A0A1W2PP18 115 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 HOXA2O43364 376 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 ERAL1O75616 437 aaKnown RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 ACRP10323 421 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 MYBPC1Q00872 1141 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 SCAPQ12770 1279 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 OTUD1Q5VV17 481 aaPredicted RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 MFSD6LQ8IWD5 586 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 GTPBP3Q969Y2 492 aaKnown RBP13.48□□□□□ -0.25
NCLN-201ENST00000246117 LRRC3Q9BY71 257 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 TPRKBQ9Y3C4 175 aa13.48□□□□□ -0.25
NCLN-201ENST00000246117 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 BCKDKO14874 412 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 MFN2O95140 757 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 CATP04040 527 aaKnown RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 MAMDC4Q6UXC1 1216 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 TRIM74Q86UV6 250 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 RETREG3Q86VR2 466 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 UBE2J2Q8N2K1 259 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 FAM110BQ8TC76 370 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 APOL4Q9BPW4 351 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■■■□□ 18.7
NCLN-201ENST00000246117 MAP10Q9P2G4 905 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 TMCC3Q9ULS5 477 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ARIH1Q9Y4X5 557 aaPredicted RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 CFAP20Q9Y6A4 193 aaKnown RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 USP3Q9Y6I4 520 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ARFGEF1Q9Y6D6 1849 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 TRBV23OR9-2A0A075B6M9 112 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 C7orf72A4D263 438 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 MUSKO15146 869 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 CNOT3O75175 753 aaKnown RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 CLDN9O95484 217 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 KRT8P05787 483 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 AZGP1P25311 298 aaKnown RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 CACNG1Q06432 222 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 RGS21Q2M5E4 152 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ADGRF1Q5T601 910 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 OGFRL1Q5TC84 451 aaPredicted RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 Q6ZVU0 165 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 CYS1Q717R9 158 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 LMNTD1Q8N9Z9 388 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 POC5Q8NA72 575 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 C7orf57Q8NEG2 295 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 OR13J1Q8NGT2 312 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ZHX1-C8orf76Q96EF9 292 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ZNF558Q96NG5 402 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 GSTO2Q9H4Y5 243 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 TLR9Q9NR96 1032 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 SCML2Q9UQR0 700 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 MBLAC1A4D2B0 266 aaPredicted RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 FPGTO14772 594 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 TFECO14948 347 aaPredicted RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 GPIP06744 558 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 PTNP21246 168 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ZXDBP98169 803 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms