RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 GABPB2Q8TAK5 448 aaPredicted RBP16.69■□□□□ 0.26
CDKN1A-201ENST00000244741 CXorf40AQ8TE69 158 aa16.69■□□□□ 0.26
CDKN1A-201ENST00000244741 SERPINI1Q99574 410 aa16.69■□□□□ 0.26
CDKN1A-201ENST00000244741 KLHL4Q9C0H6 718 aa16.69■□□□□ 0.26
CDKN1A-201ENST00000244741 LAMA1P25391 3075 aa16.69■□□□□ 0.26
CDKN1A-201ENST00000244741 WDR87Q6ZQQ6 2873 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 STX16-NPEPL1H3BU86 382 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 MAP3K13O43283 966 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 SNUPNO95149 360 aaKnown RBP16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 WISP3O95389 354 aaPredicted RBP16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 RBP1P09455 135 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 SPINT3P49223 89 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 SEMA3AQ14563 771 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 ZRANB3Q5FWF4 1079 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 PIM3Q86V86 326 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 PELI3Q8N2H9 469 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 CCDC126Q96EE4 140 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 NPAS2Q99743 824 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 WDR41Q9HAD4 459 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 EFCAB1Q9HAE3 211 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 NCKAP1Q9Y2A7 1128 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 CRYL1Q9Y2S2 319 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 TMEM221A6NGB7 291 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 M0R296 226 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 GAPDHSO14556 408 aaPredicted RBP16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 LZTS3O60299 673 aaPredicted RBP16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 PRAMEF1O95521 474 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 LYNP07948 512 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 NFKBIAP25963 317 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 XIAPP98170 497 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 ART3Q13508 389 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 LAMB3Q13751 1172 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 TRIP10Q15642 601 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 CUZD1Q86UP6 607 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 PIANPQ8IYJ0 282 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 PGAM4Q8N0Y7 254 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 RNF148Q8N7C7 305 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 PHC3Q8NDX5 983 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 OR4L1Q8NH43 312 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 YIPF3Q9GZM5 350 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 ALG9Q9H6U8 611 aa16.68■□□□□ 0.26
CDKN1A-201ENST00000244741 RECQL5O94762 991 aaPredicted RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 ZNF30P17039 623 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 RPS9P46781 194 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 AQP4P55087 323 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 MS4A2Q01362 244 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 ACVR1Q04771 509 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 CHRNA6Q15825 494 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 GK5Q6ZS86 529 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 SDCCAG8Q86SQ7 713 aaPredicted RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 ISCA2Q86U28 154 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 RAB7BQ96AH8 199 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 CCDC97Q96F63 343 aaPredicted RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 MYOCQ99972 504 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 RIOK2Q9BVS4 552 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 EML4Q9HC35 981 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 SPATA6Q9NWH7 488 aaPredicted RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 ZFR2Q9UPR6 939 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 FRYLO94915 3013 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 SCN8AQ9UQD0 1980 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 GLYATL1P3A0A0U1RQE8 302 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 K7ESM1 405 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 UBFD1O14562 309 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 CASQ2O14958 399 aaPredicted RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 CD3EAPO15446 510 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 PLRG1O43660 514 aaKnown RBP16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 CXCL12P48061 93 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 PPP2CBP62714 309 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 PPP2CAP67775 309 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 DMWDQ09019 674 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 PPP1R3AQ16821 1122 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 ZNF549Q6P9A3 640 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 CHSY3Q70JA7 882 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 TAS2R42Q7RTR8 314 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 HMGCLL1Q8TB92 370 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 FAR2Q96K12 515 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 SPATA16Q9BXB7 569 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 GSTO2Q9H4Y5 243 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 MEAF6Q9HAF1 191 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 ITM2CQ9NQX7 267 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 PKD2L2Q9NZM6 624 aa16.67■□□□□ 0.26
CDKN1A-201ENST00000244741 A0A1W2PQU0 124 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 SRP72O76094 671 aaKnown RBP16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 PAK4O96013 591 aaPredicted RBP16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 ZCCHC18P0CG32 403 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 TSPAN8P19075 237 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 SPAM1P38567 509 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 TIAL1Q01085 375 aaKnown RBP eCLIP16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 FLOT2Q14254 428 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 TMEM52BQ4KMG9 183 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 RNF220Q5VTB9 566 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 TECPR1Q7Z6L1 1165 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 CBARPQ8N350 705 aaPredicted RBP16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 DEFB119Q8N690 84 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 COQ10AQ96MF6 247 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 VCX3BQ9H321 246 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 FAM83DQ9H4H8 585 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 ASB8Q9H765 288 aa16.66■□□□□ 0.26
CDKN1A-201ENST00000244741 FZD3Q9NPG1 666 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms