RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MAPRE3Q9UPY8 281 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 C5orf60A6NFR6 353 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 SOCS2O14508 198 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 SCN2BO60939 215 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 STBD1O95210 358 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 FRRS1Q6ZNA5 592 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZFP41Q8N8Y5 198 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TRIB2Q92519 343 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 PPP3R2Q96LZ3 170 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TSPAN18Q96SJ8 248 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 BRD7Q9NPI1 651 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 FABP12A6NFH5 140 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 KLHL35Q6PF15 583 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 SLC37A3Q8NCC5 494 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 TREM1Q9NP99 234 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 MAGEL2Q9UJ55 1249 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 NUP50Q9UKX7 468 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TCAF1Q9Y4C2 921 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ISM1B1AKI9 464 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TNFRSF10BO14763 440 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 PPEF2O14830 753 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 HIST1H2ABP04908 130 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 LPOP22079 712 aaPredicted RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 C9orf57Q5W0N0 161 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 HIST3H2AQ7L7L0 130 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 HIST1H2ACQ93077 130 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 NMUR1Q9HB89 426 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 IL1RAPQ9NPH3 570 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 POU2F3Q9UKI9 436 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CACNA1IQ9P0X4 2223 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 DDNO94850 711 aaPredicted RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 ALDH2P05091 517 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZNF431Q8TF32 576 aaPredicted RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 NSMCE3Q96MG7 304 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZNF670Q9BS34 389 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 DPCDQ9BVM2 203 aaPredicted RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 DCSTAMPQ9H295 470 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CABYRO75952 493 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 RPS3P23396 243 aaKnown RBP eCLIP7.41□□□□□ -1.22
RIF1-201ENST00000243326 RAB39AQ14964 217 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ADGRG6Q86SQ4 1221 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 OR13C4Q8NGS5 318 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 PTCD2Q8WV60 388 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 FAXDC2Q96IV6 333 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 FTHL17Q9BXU8 183 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 PSAT1Q9Y617 370 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ARHGAP23Q9P227 1491 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 OTCP00480 354 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 IL1BP01584 269 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ANXA4P09525 319 aaPredicted RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 CLUP10909 449 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 C6orf89Q6UWU4 347 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 TMEM151AQ8N4L1 468 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 OR52L1Q8NGH7 329 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ACMSDQ8TDX5 336 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 FBRSQ9HAH7 460 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ARHGEF4Q9NR80 690 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 MMP8P22894 467 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 MMP14P50281 582 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZBTB6Q15916 424 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZNF354BQ96LW1 612 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ERVK13-1Q9NX77 482 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 FKBP7Q9Y680 259 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 GMEB1Q9Y692 573 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ADAMTS13Q76LX8 1427 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 K7EPI3 171 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 TRAFD1O14545 582 aaPredicted RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 EPHX2P34913 555 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ARPC4P59998 168 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 MAP1SQ66K74 1059 aaPredicted RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 BPIFB1Q8TDL5 484 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 NEK7Q8TDX7 302 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 MSANTD3Q96H12 275 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 HSD17B14Q9BPX1 270 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 UNC93B1Q9H1C4 597 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 RWDD3Q9Y3V2 267 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 PDHXO00330 501 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 CYP2A6P11509 494 aaPredicted RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 SSR2P43308 183 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 OR1E2P47887 323 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 OCLNQ16625 522 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SPATA19Q7Z5L4 167 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 MARCH9Q86YJ5 346 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 PLCZ1Q86YW0 608 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 TBC1D14Q9P2M4 693 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZDBF2Q9HCK1 2354 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 SCGB1D2O95969 90 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 ACTR3P61158 418 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 CES5AQ6NT32 575 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SLC43A3Q8NBI5 491 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 DSN1Q9H410 356 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 IMP3Q9NV31 184 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 LIMK2P53671 638 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SLC3A1Q07837 685 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZNF438Q7Z4V0 828 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 TRPV1Q8NER1 839 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms