RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 TXNDC16Q9P2K2 825 aa23.12■■□□□ 1.29
HOMER3-201ENST00000221222 KLHL42Q9P2K6 505 aa23.12■■□□□ 1.29
HOMER3-201ENST00000221222 PADI4Q9UM07 663 aa23.12■■□□□ 1.29
HOMER3-201ENST00000221222 PSMD13Q9UNM6 376 aa23.12■■□□□ 1.29
HOMER3-201ENST00000221222 CDYLQ9Y232 598 aa23.12■■□□□ 1.29
HOMER3-201ENST00000221222 RIPK2O43353 540 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 SLCO2B1O94956 709 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 MYF5P13349 255 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 XRCC1P18887 633 aaPredicted RBP23.11■■□□□ 1.29
HOMER3-201ENST00000221222 ACP1P24666 158 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 PDHA2P29803 388 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 GP5P40197 560 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 ABCG1P45844 678 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 FASLGP48023 281 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 PREPP48147 710 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 CLCN7P51798 805 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 TRIP6Q15654 476 aaKnown RBP23.11■■□□□ 1.29
HOMER3-201ENST00000221222 PLEKHS1Q5SXH7 462 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 NAPRTQ6XQN6 538 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 AVL9Q8NBF6 648 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 NDNQ99608 321 aa23.11■■□□□ 1.29
HOMER3-201ENST00000221222 SARS2Q9NP81 518 aaKnown RBP23.11■■□□□ 1.29
HOMER3-201ENST00000221222 ZNF624Q9P2J8 865 aaPredicted RBP23.11■■□□□ 1.29
HOMER3-201ENST00000221222 A0A087WUV0 522 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 NUDT21O43809 227 aaKnown RBP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 VPS26AO75436 327 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 GLB1P16278 677 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 MAZP56270 477 aaKnown RBP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 UBE2IP63279 158 aaKnown RBP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 TIAL1Q01085 375 aaKnown RBP eCLIP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 HSPA14Q0VDF9 509 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 GBX1Q14549 363 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 NAA30Q147X3 362 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 EFTUD2Q15029 972 aaKnown RBP eCLIP23.1■■□□□ 1.292e-6■■■■■ 36.6
HOMER3-201ENST00000221222 BRD3Q15059 726 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 RPE65Q16518 533 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 SLC9B2Q86UD5 537 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 SLC22A15Q8IZD6 547 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 SPDYE1Q8NFV5 336 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 AENQ8WTP8 325 aaKnown RBP23.1■■□□□ 1.29
HOMER3-201ENST00000221222 NAT6Q93015 286 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 RMDN2Q96LZ7 410 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 RBBP8Q99708 897 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 EPB41L4BQ9H329 900 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 GALPQ9UBC7 116 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 CPNE7Q9UBL6 633 aa23.1■■□□□ 1.29
HOMER3-201ENST00000221222 OR52A4PA6NMU1 304 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 C1QTNF9BB2RNN3 333 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 C1QTNF9P0C862 333 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 SLC19A1P41440 591 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 ACADVLP49748 655 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 DNAJC3Q13217 504 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.09■■□□□ 1.29
HOMER3-201ENST00000221222 GRTP1Q5TC63 336 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 FAM45BPQ6NSW5 357 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 GUSBP11Q6P575 273 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 EMBQ6PCB8 327 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 ZNF438Q7Z4V0 828 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 PDZD3Q86UT5 571 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 ZBTB2Q8N680 514 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 GPATCH11Q8N954 259 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 GIMAP7Q8NHV1 300 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 FAM45AQ8TCE6 357 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 VPS39Q96JC1 886 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 INSM2Q96T92 566 aaPredicted RBP23.09■■□□□ 1.29
HOMER3-201ENST00000221222 GPR21Q99679 349 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 POT1Q9NUX5 634 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 TAS2R13Q9NYV9 303 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 VWA7Q9Y334 891 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 DHRS7Q9Y394 339 aa23.09■■□□□ 1.29
HOMER3-201ENST00000221222 IGF2RP11717 2491 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 TRBV23OR9-2A0A075B6M9 112 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 PNLIPP16233 465 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 ACADLP28330 430 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 ATP5DP30049 168 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 SKIV2L2P42285 1042 aaKnown RBP23.08■■□□□ 1.29
HOMER3-201ENST00000221222 CDKN2DP55273 166 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 SIM1P81133 766 aaPredicted RBP23.08■■□□□ 1.29
HOMER3-201ENST00000221222 KLHL38Q2WGJ6 581 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 HECTD2Q5U5R9 776 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 UGT3A1Q6NUS8 523 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 VRK3Q8IV63 474 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 CD200R1Q8TD46 325 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 FAM136AQ96C01 138 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 ATXN7L3BQ96GX2 97 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 C12orf66Q96MD2 445 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 SLC30A3Q99726 388 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 TOR4AQ9NXH8 423 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 RNF215Q9Y6U7 377 aa23.08■■□□□ 1.29
HOMER3-201ENST00000221222 ASXL3Q9C0F0 2248 aa23.08■■□□□ 1.28
HOMER3-201ENST00000221222 FAM95CA0A1B0GW59 222 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 CPED1A4D0V7 1026 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 IFRD1O00458 451 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-201ENST00000221222 GP1BAP07359 652 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 MTHFD1P11586 935 aaKnown RBP23.07■■□□□ 1.28
HOMER3-201ENST00000221222 FDXRP22570 491 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 SPRP35270 261 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-201ENST00000221222 LIMK2P53671 638 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 HHEXQ03014 270 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 ILKQ13418 452 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms