RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 S100ZQ8WXG8 99 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 SUCOQ9UBS9 1254 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC15A5A6NIM6 579 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 ALOX5P09917 674 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 CKMT2P17540 419 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 ARL2P36404 184 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 CLK3P49761 638 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 BHLHB9Q6PI77 547 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 ARMCX6Q7L4S7 300 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 OAFQ86UD1 273 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 NRSN1Q8IZ57 195 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 ZNF483Q8TF39 744 aaPredicted RBP13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 SMG9Q9H0W8 520 aaKnown RBP13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 DTLQ9NZJ0 730 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 RIMKLBQ9ULI2 386 aa13.43□□□□□ -0.26
TGFBR3-201ENST00000212355 CAMK1Q14012 370 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 COLEC12Q5KU26 742 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 CWF19L1Q69YN2 538 aaKnown RBP13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ZDHHC21Q8IVQ6 265 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 AADATQ8N5Z0 425 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 CLEC4DQ8WXI8 215 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ZNF304Q9HCX3 659 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 CPQQ9Y646 472 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 A8MV72 311 aaPredicted RBP13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ZNF879B4DU55 563 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 AIREO43918 545 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 CSKP41240 450 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 GNA12Q03113 381 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 TUSC3Q13454 348 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 BRMS1LQ5PSV4 323 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 LRRC52Q8N7C0 313 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 OR5M3Q8NGP4 307 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 OR52B2Q96RD2 323 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 AIF1LQ9BQI0 150 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ATXN10Q9UBB4 475 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ZNF221Q9UK13 617 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ZNF214Q9UL59 606 aaPredicted RBP13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 STXBP5LQ9Y2K9 1186 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 TBX1O43435 398 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 PSKH1P11801 424 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 CBLP22681 906 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 LILRA4P59901 499 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 RPS24P62847 133 aaKnown RBP13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 DNASE1L3Q13609 305 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 MSANTD2Q6P1R3 559 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 LINGO2Q7L985 606 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 STYXQ8WUJ0 223 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 BORCS5Q969J3 196 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 C3orf14Q9HBI5 128 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 STOML2Q9UJZ1 356 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 POMPQ9Y244 141 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 CH25HO95992 272 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 TAS2R39P59534 338 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 SP140Q13342 867 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 TSTD2Q5T7W7 516 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ASB18Q6ZVZ8 466 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 OR8H3Q8N146 312 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 NLGN2Q8NFZ4 835 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 AP3S1Q92572 193 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 TLE6Q9H808 572 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 SP140LQ9H930 580 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 PRAMEF33A0A0G2JMD5 474 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 PRAMEF10O60809 474 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ECDO95905 644 aaPredicted RBP13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 NUDT6P53370 316 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 TARDBPQ13148 414 aaKnown RBP eCLIP13.42□□□□□ -0.262e-8■■■■■ 34.5
TGFBR3-201ENST00000212355 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ZDHHC24Q6UX98 284 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 HFE2Q6ZVN8 426 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 SPATC1Q76KD6 591 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 ABCG4Q9H172 646 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 MSRAQ9UJ68 235 aa13.42□□□□□ -0.26
TGFBR3-201ENST00000212355 C2CD4BA6NLJ0 364 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 J3KR12 359 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 EI24O14681 340 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 PLIN3O60664 434 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 GKP32189 559 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 CTSOP43234 321 aaPredicted RBP13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 FCHO2Q0JRZ9 810 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 ACAP2Q15057 778 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 AMZ1Q400G9 498 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 USP30Q70CQ3 517 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 CYP2U1Q7Z449 544 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 UPF1Q92900 1129 aaKnown RBP eCLIP13.41□□□□□ -0.263e-7■■■■□ 23.7
TGFBR3-201ENST00000212355 TUBGCP5Q96RT8 1024 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 OR2AG1Q9H205 316 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 DUS2Q9NX74 493 aaKnown RBP13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 ZDHHC2Q9UIJ5 367 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 URADA6NGE7 173 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 TSPAN4O14817 238 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 WFS1O76024 890 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 ADH1CP00326 375 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 GMPRP36959 345 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 GDF5P43026 501 aa13.41□□□□□ -0.26
TGFBR3-201ENST00000212355 RTL4Q6ZR62 310 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms