RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Slc2a4P14142 509 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fli1P26323 452 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Casp1P29452 402 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 TktP40142 623 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Sox6P40645 827 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mkl2P59759 1080 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rps3P62908 243 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vamp7P70280 220 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Oas1fQ14AZ4 364 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fscn2Q32M02 492 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 CrhbpQ60571 322 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 GcdhQ60759 438 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 StyxQ60969 223 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Krba1Q6NXZ1 1043 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vat1lQ80TB8 417 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cyp20a1Q8BKE6 462 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 CptpQ8BS40 216 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kyat1Q8BTY1 424 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gpr152Q8BXS7 511 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ifi205aQ8CGE8 404 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kiaa1024Q8K3V7 917 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cdk8Q8R3L8 464 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 AdigQ8R400 80 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pcdhb1Q91Y08 818 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Snx10Q9CWT3 201 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Polr3hQ9D2C6 204 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tnfsf13Q9D777 241 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Hm13Q9D8V0 378 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slco2a1Q9EPT5 643 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tnfrsf21Q9EPU5 655 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mpp6Q9JLB0 553 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem59Q9QY73 323 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mup19A9C497 187 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nfx1B1AY10 1114 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mup8E9PVW0 235 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm3893E9Q1I1 302 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mup7E9QA79 235 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn2r58K7N6V2 862 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fcgr2P08101 330 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ugt2b17P17717 530 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gpx3P46412 226 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Adcy7P51829 1099 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gtf2bP62915 316 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Taf1bP97358 586 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ptpn2Q06180 406 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 IdsQ08890 552 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 LcorlQ3U285 600 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gpd1lQ3ULJ0 351 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Serpinf2Q61247 491 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc13a5Q67BT3 572 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ManeaQ6NXH2 462 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kctd12Q6WVG3 327 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Sgo2Q7TSY8 1164 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Moxd2Q7TT41 619 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem106cQ80VP8 260 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Clec9aQ8BRU4 238 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Prpsap2Q8R574 369 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr677Q8VF06 312 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pcdhgb1Q91XX8 918 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 SvbpQ99LQ4 66 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Dph2Q9CR25 489 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Eef1e1Q9D1M4 174 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cst11Q9D269 139 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Borcs6Q9D6W8 360 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pcsk1nQ9QXV0 258 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Acox1Q9R0H0 661 aaKnown RBP9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gdf2Q9WV56 428 aa9.6□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ly75Q60767 1723 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm6509A0A0J9YUV1 481 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm45194A0A140LJG2 572 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm8127E9Q0P0 100 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr419E9Q0Y7 313 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn2r54K7N649 806 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm8094K7N6U8 211 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ncam2O35136 837 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cbx4O55187 551 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tpst1O70281 370 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 H2-EaP01904 255 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 P04224 255 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Il2P04351 169 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Bmp6P20722 510 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Meox2P32443 303 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gbx2P48031 348 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 AcadlP51174 430 aaKnown RBP9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tanc1Q0VGY8 1856 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tamm41Q3TUH1 337 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Zfp217Q3U0X6 1041 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lrrc58Q3UGP9 366 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 C1orf109Q499E6 217 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 FcrlbQ5DRQ8 427 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Abhd15Q5F2F2 459 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 NkaplQ5SZT7 395 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pou4f3Q63955 338 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Doxl2Q6IMK7 723 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 GanabQ8BHN3 944 aaKnown RBP9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Dlec1Q8BLA1 635 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ccdc184Q8BMK5 191 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ttc24Q8BYG0 334 aa9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gatad2aQ8CHY6 629 aaKnown RBP9.59□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mrpl47Q8K2Y7 252 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms