RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Pxmp2P42925 194 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Aldh2P47738 519 aaKnown RBP14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Btbd1P58544 488 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Naf1Q3UMQ8 489 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Ermp1Q3UVK0 898 aaKnown RBP14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Tas2r106Q7M724 308 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Susd6Q8BGE4 302 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Svs2Q8BS30 375 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Q8CCC3 530 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Olfr30Q8VGD8 315 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Lims2Q91XD2 341 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Nek6Q9ES70 313 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Timp4Q9JHB3 224 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 D7h11orf16Q9JJR6 402 aa14.58□□□□□ -0.07
Ushbp1-201ENSMUST00000049184 Olfr1006A2ALD2 312 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Iqca1lA6H690 825 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 4930579F01RikE9Q3L6 325 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Capns1O88456 269 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Cdh3P10287 822 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Fv4P11370 679 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Nr5a2P45448 560 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Cct7P80313 544 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 NyxP83503 476 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Gsdmc2Q2KHK6 480 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 SbplQ3TUY3 232 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Gpr149Q3UVY1 732 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Trpc1Q61056 793 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Bhlhb9Q6PB60 539 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Olfr1415Q7TQS4 311 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Arl5aQ80ZU0 179 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Vmn1r199Q8R280 367 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 FggQ8VCM7 436 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Olfr1416Q8VGU4 312 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Diras1Q91Z61 198 aa14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 VapaQ9WV55 249 aaKnown RBP14.58□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Pkd2l1A2A259 760 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Vmn2r67K7N6T2 851 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Vmn2r53L7N473 806 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 RbpjlO08674 515 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 AldocP05063 363 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Serpinb2P12388 415 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 H2-Q8P14430 326 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Copz1P61924 177 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Pcsk1P63239 753 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 H2-Q6P79568 326 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Igfbp5Q07079 271 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Rab42Q0PD08 215 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 PepdQ11136 493 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Q3KNL4 93 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Tespa1Q3U132 458 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Sel1l2Q3V172 688 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Hsd3b5Q61694 373 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 BegainQ68EF6 600 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Slain1Q68FF7 579 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Apex2Q68G58 516 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Usp7Q6A4J8 1103 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 MaobQ8BW75 520 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Kcnv1Q8BZN2 503 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Gm4922Q8C0N0 497 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Dcaf12l1Q8CBW4 501 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Acap1Q8K2H4 740 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Klhl25Q8R2P1 589 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Olfr846Q8VET8 312 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Setd7Q8VHL1 366 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Fars2Q99M01 451 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 CatsperzQ9CQP8 194 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Kat8Q9D1P2 458 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 AcadsbQ9DBL1 432 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Hapln2Q9ESM3 341 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Cpne6Q9Z140 557 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Gm5485A0A1D5RM98 91 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Kcna10B2RQA1 511 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Vmn1r184E9Q2N4 314 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Maml2F6U238 1170 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Hoxd4P10628 250 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Kcnj12P52187 427 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 WasP70315 520 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Sdr16c6Q05A13 316 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 LvrnQ2KHK3 559 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Ulk3Q3U3Q1 472 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Smarcd1Q61466 515 aaKnown RBP14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Msi1Q61474 362 aaKnown RBP14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Gtf2a2Q80ZM7 109 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 B430218F22RikQ8BQR5 223 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 DrgxQ8BYH0 263 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 MpstQ99J99 297 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Mrpl1Q99N96 336 aaKnown RBP14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Det1Q9D0A0 550 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 D10Jhu81eQ9D172 266 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Rpl34Q9D1R9 117 aaKnown RBP14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Cyp2g1Q9WV19 494 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Dock1Q8BUR4 1865 aa14.57□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Faap100A2ACJ2 879 aa14.56□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Fam131cA2ADB2 273 aa14.56□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Gm20441G3UYJ7 252 aa14.56□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Ptch2O35595 1182 aa14.56□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Lhx8O35652 367 aa14.56□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Igf2bp1O88477 577 aaKnown RBP14.56□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 Hipk1O88904 1210 aa14.56□□□□□ -0.08
Ushbp1-201ENSMUST00000049184 CfhP06909 1234 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms