RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rin1Q921Q7 763 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ampd2Q9DBT5 798 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Serpini2Q9JK88 405 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Clcn2Q9R0A1 908 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fbxo47A2A6H3 451 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Snx3O70492 162 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ntsr2P70310 416 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Trp53i11Q4QQM4 189 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 2700097O09RikQ6PGK3 301 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 AptxQ7TQC5 342 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr394Q8VGR5 310 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mtfr1Q99MB2 328 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rrp8Q9DB85 457 aaKnown RBP11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cst9Q9Z0H6 137 aa11.71□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm28961A0A087WPA5 222 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm21858A0A087WQ24 222 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 1700001O22RikA2APZ1 375 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn2r125D3Z3M1 369 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm17175E9Q528 179 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tnfsf4P43488 198 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Bpifa1P97361 278 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fpr-rs6Q3SXG2 339 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fam98aQ3TJZ6 515 aaKnown RBP11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Xkr4Q5GH67 647 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Yipf4Q8C407 246 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Exd1Q8CDF7 570 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gas2l1Q8JZP9 678 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Dclre1cQ8K4J0 705 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 ClmpQ8R373 373 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 McmbpQ8R3C0 642 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Basp1Q91XV3 226 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ccdc86Q9JJ89 426 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pdzd7E9Q9W7 1021 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gp1baO35930 734 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 AldoaP05064 364 aaKnown RBP11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Bmpr1aP36895 532 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lhx3P50481 400 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Wdr5P61965 334 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Plac9Q8K262 108 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cnot6Q8K3P5 557 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rex1bdQ9CYZ6 169 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mbtps1Q9WTZ2 1052 aa11.71□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ifit3bE9PV48 403 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 1600015I10RikE9Q745 711 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm6337K7N6X9 211 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm3115L7N285 211 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Dnase1l3O55070 310 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Impdh1P50096 514 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lingo3Q6GQU6 589 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Osgepl1Q6PEB4 414 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr1313Q7TQW8 311 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rab36Q8CAM5 267 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr1276Q8VF40 312 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr1325Q8VF43 315 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 TympQ99N42 471 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sgk2Q9QZS5 367 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Actl10A2AKE7 346 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Csn1s1P19228 313 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Agtr2P35374 363 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Dsc1P55849 886 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pim3P58750 326 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Chsy3Q5DTK1 884 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 H2-M10.2Q85ZW9 329 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gramd1cQ8CI52 457 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Nxnl2Q9D531 156 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 4930513O06RikQ9D549 161 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ttc9bQ9D6E4 239 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr1480A0A140LIR8 359 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr566A0A1B0GST0 319 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm35911A0A1D5RLS7 214 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 PiggD3Z3Y1 983 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Amd2D3Z6H8 334 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm3594E9Q2A7 267 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gh1P06880 216 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Amd1P0DMN7 334 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Svs4P18419 113 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 ptchd1Q14B62 888 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rgs8Q8BXT1 180 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Stx18Q8VDS8 334 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rmnd5bQ91YQ7 393 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gkn2Q9CQS6 184 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lrrc17Q9CXD9 443 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Aqp5Q9WTY4 265 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm8180E9PXN0 145 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sypl1O09117 261 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Usp2O88623 613 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gsk3aQ2NL51 490 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 SbplQ3TUY3 232 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cep295nlQ497N6 533 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Stxbp5lQ5DQR4 1185 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Map2k2Q63932 401 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 MregQ6NVG5 214 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmcc2Q80W04 706 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Arl15Q8BGR6 204 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 GskipQ8BGR8 139 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Imp4Q8VHZ7 291 aaKnown RBP11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmem98Q91X86 226 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Uts2Q9QZQ3 123 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Atp6v1g2Q9WTT4 118 aa11.7□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Akap3O88987 864 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms