RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Khdc3Q9CWU5 440 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ap3s1Q9DCR2 193 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 DguokQ9QX60 277 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CasrQ9QY96 1079 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fkbp9Q9Z247 570 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 FocadA2AKG8 1798 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Klhl4B1AZR0 717 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp563B8JJZ9 448 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Vmn1r238E9Q373 306 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm8909G3UXE9 396 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm3336J3QMQ6 198 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Elovl3O35949 271 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Scg5P12961 212 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 BgnP28653 369 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cdh5P55284 784 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Btbd3P58545 530 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Psme2P97372 239 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ankdd1bQ14DN9 521 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Khdc4Q3TCX3 612 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Jak3Q62137 1100 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tead4Q62296 427 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Adam39Q7M762 756 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tbc1d17Q8BYH7 645 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Exo5Q9CXP9 373 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ift27Q9D0P8 186 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Bcas2Q9D287 225 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 NagaQ9QWR8 415 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cst9Q9Z0H6 137 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ttll8A4Q9F1 832 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zscan4bE9Q3G0 505 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nkx1-1G3UXB3 402 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 FynP39688 537 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pex2P55098 305 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Chsy3Q5DTK1 884 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc29a2Q61672 456 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Adamts16Q69Z28 1222 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rsbn1Q80T69 795 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ostm1Q8BGT0 338 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tusc3Q8BTV1 347 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rgs8Q8BXT1 180 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Hat1Q8BY71 416 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Kdelr3Q8R1L4 214 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Igsf8Q8R366 611 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Themis3Q9CU24 569 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmed11Q9D2R4 215 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Armc8Q9DBR3 673 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 ChmlQ9QZD5 621 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gpc1Q9QZF2 557 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Spin2-ps6A0A140T8V2 174 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 6720489N17RikA0A1Y7VJW0 127 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm13088A2AGW6 460 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 C7D3YXF5 845 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Klhl3E0CZ16 587 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Kifc5bE9PUA5 672 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dnmt3aO88508 908 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 F2P19221 618 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gna13P27601 377 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rab12P35283 243 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Traf6P70196 530 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TekQ02858 1122 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fpr-rs6Q3SXG2 339 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Brf2Q3UAW9 420 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tnks2Q3UES3 1166 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Klhl6Q6V595 619 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 4933402J07RikQ8BHX0 270 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gper1Q8BMP4 375 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nuak2Q8BZN4 639 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ints14Q8R3P6 515 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem150aQ91WN2 271 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Taldo1Q93092 337 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 4930519G04RikQ9CPT7 205 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Hddc3Q9D114 179 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TesclQ9DAJ7 231 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Natd1Q9DBW3 110 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyp2g1Q9WV19 494 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tle2Q9WVB2 767 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nt5c1aA3KFX0 365 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm20695H3BLK7 282 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rundc3aO08576 446 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Man2b1O09159 1013 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ring1O35730 406 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nfkbil1O88995 381 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cdh1P09803 884 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Eno2P17183 434 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 InaP46660 501 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Hnf4aP49698 474 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyp2a12P56593 492 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Eml1Q05BC3 814 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ipcef1Q5DU31 406 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr464Q5SW48 313 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyp3a16Q64481 504 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cfap97Q6ZPR1 541 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ift80Q8K057 777 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Polr1eQ8K202 482 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Eva1bQ8K2Y3 164 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc51aQ8R000 340 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 GrpQ8R1I2 146 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr273Q8VG87 317 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TraipQ8VIG6 470 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Chil4Q91Z98 402 aa10.15□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms