RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 AprtP08030 180 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nr5a2P45448 560 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nudt2P56380 147 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 SgcdP82347 289 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Glb1l2Q3UPY5 636 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Slc23a3Q60850 611 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nr6a1Q64249 495 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Usp7Q6A4J8 1103 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 VwdeQ6DFV8 926 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Klhl5Q6PFE1 708 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cd300aQ6SJQ0 318 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tmem220Q8BP07 167 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gykl1Q8C635 549 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zfp940Q8R2Q3 566 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Actr8Q8R2S9 624 aaKnown RBP13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 NwcQ9CQI4 244 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 PpidQ9CR16 370 aaKnown RBP13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ly6kQ9CWP4 154 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ints11Q9CWS4 600 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Dcdc2cQ9D1B8 347 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nos1apQ9D3A8 503 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hacl1Q9QXE0 581 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cyp2g1Q9WV19 494 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr1480A0A140LIR8 359 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gp1bbP56400 206 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 IqcmQ149I8 489 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 MslnQ61468 625 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Adgrd1Q80T32 903 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Trim62Q80V85 475 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cpped1Q8BFS6 312 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Chst8Q8BQ86 417 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Kdelr3Q8R1L4 214 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ccdc92Q8VDN4 314 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr985Q8VGB4 311 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gorasp1Q91X51 446 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tex13bQ99MW5 186 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Trim33Q99PP7 1142 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Anks3Q9CZK6 655 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 VasnQ9CZT5 673 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Snx5Q9D8U8 404 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Slco1a4Q9EP96 670 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Dpp7Q9ET22 506 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 DnpepQ9Z2W0 473 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Krt6bQ9Z331 562 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Faap100A2ACJ2 879 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm6133B2RY53 190 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm7535F7CXE4 302 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gstm1P10649 218 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 H2-Q8P14430 326 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Esr1P19785 599 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Sox2P48432 319 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Atoh1P48985 351 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 H2-Q6P79568 326 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Mdga1Q0PMG2 940 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zdhhc11Q14AK4 347 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Foxk2Q3UCQ1 651 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Clec12aQ504P2 267 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr1046Q7TR79 316 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fam72aQ8BFZ8 149 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rab39aQ8BHD0 217 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Znf410Q8BKX7 478 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 PdhxQ8BKZ9 501 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Q8CDN1 933 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Atg10Q8R1P4 215 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Lsm1Q8VC85 133 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rprd1aQ8VDS4 312 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr1311Q8VET0 312 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr589Q8VGV8 317 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 GlyatQ91XE0 296 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Far1Q922J9 515 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fars2Q99M01 451 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hmg20aQ9DC33 346 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Msgn1Q9JK54 188 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zbp1Q9QY24 411 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Sae1Q9R1T2 350 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr1006A2ALD2 312 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr1247A2AT78 314 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm8369E9PZI3 166 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Vmn2r91E9Q2U5 856 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 C6E9Q6D8 931 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm20441G3UYJ7 252 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm21897J3KMP5 500 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm21750L7N228 499 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Sh3yl1O08641 340 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Angpt2O35608 496 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 GfapP03995 430 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 JunP05627 334 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 GzmcP08882 248 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Klrb1bP27812 223 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rps3aP97351 264 aaKnown RBP13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fpr-rs6Q3SXG2 339 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Lpcat1Q3TFD2 534 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gpr149Q3UVY1 732 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tmem247Q497K7 211 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Mon1aQ6PDG8 556 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr366Q7TRY4 309 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zmpste24Q80W54 475 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Klhl26Q8BGY4 606 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ptbp3Q8BHD7 523 aaKnown RBP13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ldhal6bQ8BVP2 382 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms