RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ppef1O35655 650 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Sptlc1O35704 473 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gtf2h4O70422 463 aaKnown RBP16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fv4P11370 679 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ptpn5P54830 541 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Nudt2P56380 147 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Tmem181aQ3U3W2 474 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ppp1r26Q6A025 1163 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ggt6Q6PDE7 497 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Kif18bQ6PFD6 834 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Znf503Q7TMA2 652 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 FukQ7TMC8 1090 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Arhgef38Q80VK6 770 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Prmt5Q8CIG8 637 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ptov1Q91VU8 416 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Zfand2bQ91X58 257 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 AcadsbQ9DBL1 432 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 IgtpQ9DCE9 423 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Adam25Q9R159 760 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Limk2O54785 638 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 LvrnQ2KHK3 559 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Sel1l2Q3V172 688 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Lcp2Q60787 533 aaKnown RBP16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fam120bQ6RI63 786 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Snx4Q91YJ2 450 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Bud23Q9CY21 281 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pik3cgQ9JHG7 1102 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 D7h11orf16Q9JJR6 402 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pkp3Q9QY23 797 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Olfr1354E9Q5G9 310 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Zfr2E9Q5M4 874 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gm8909G3UXE9 396 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pole2O54956 527 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 NagluO88325 739 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Anxa6P14824 673 aaKnown RBP16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 IppP28575 584 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gdf5P43027 495 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Igfbp3P47878 292 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Kcnj12P52187 427 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Crisp1Q03401 244 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pnrc1Q3TWH3 297 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Cyp2d40Q6P8N9 338 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Chst2Q80WV3 530 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Atp6v1c2Q99L60 427 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 4921530L21RikQ9CQ47 274 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Rfc5Q9D0F6 339 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Nek6Q9ES70 313 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pdzk1Q9JIL4 519 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Vmn2r92L7N2A4 860 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gm6502L7N456 481 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Arl6O88848 186 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Orm2P07361 207 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Tcea3P23881 347 aaKnown RBP16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Casp2P29594 452 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gdf7P43029 461 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Brms1lQ3U1T3 323 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 CenplQ3U3S3 329 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Afap1l2Q5DTU0 825 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Mef2dQ63943 514 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 St8sia4Q64692 359 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Q8BP99 230 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Prl8a9Q9CQ58 241 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pbld2Q9CXN7 288 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Cep97Q9CZ62 856 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Arl14Q3SXC5 192 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Trpc1Q61056 793 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Map4k5Q8BPM2 847 aaKnown RBP16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Q8BWQ6 963 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Asb2Q8K0L0 634 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 DhrsxQ8VBZ0 335 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Q9D4W2 315 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 PnckQ9QYK9 343 aa16.61■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Zfp383A0A087WRR7 490 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Zcchc7B1AX39 541 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Vmn2r27D3YUK6 857 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gm10717D3Z1I8 228 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fgf10O35565 209 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Mtco1P00397 514 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gxylt2Q810K9 444 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Mri1Q9CQT1 369 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Xylt2Q9EPL0 865 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Spats1A2RRY8 269 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Tulp3O88413 460 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ctbp1O88712 441 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ptpn2Q06180 406 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gprin1Q3UNH4 932 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Klf4Q60793 483 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 CcncQ62447 283 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Lrrc8eQ66JT1 795 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Prkd3Q8K1Y2 889 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Olfr397Q8VEZ6 315 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pwp1Q99LL5 501 aaKnown RBP16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 PtsQ9R1Z7 144 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Clec2lP0C7M9 211 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Slc6a15Q8BG16 729 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 GmppbQ8BTZ7 360 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Zbtb20Q8K0L9 741 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fubp1Q91WJ8 651 aaKnown RBP16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Insl5Q9WUG6 135 aa16.6■□□□□ 0.25
Ctcf-201ENSMUST00000005841 MaffO54791 156 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms