RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 EPB41L4BQ9H329 900 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 GAREM1Q9H706 876 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 SNX15Q9NRS6 342 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 PCMTD2Q9NV79 361 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 KLHL42Q9P2K6 505 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 KCNK6Q9Y257 313 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 ACOT9Q9Y305 439 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 SNX11Q9Y5W9 270 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 HEBP2Q9Y5Z4 205 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 PRSS21Q9Y6M0 314 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 MYLKQ15746 1914 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 PLXNA2O75051 1894 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 IQCF5A8MTL0 148 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 EIF3FO00303 357 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-218ENST00000641491 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 TPP1O14773 563 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 AQP9O43315 295 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 FDXRP22570 491 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 CTSKP43235 329 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 ZNF844Q08AG5 666 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 RASA2Q15283 850 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 TSNAXIP1Q2TAA8 658 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 AASDHQ4L235 1098 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-218ENST00000641491 AGAP9Q5VTM2 703 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 SLC23A3Q6PIS1 610 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 MICALCLQ6ZW33 695 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 SDR16C5Q8N3Y7 309 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 PNPLA1Q8N8W4 532 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 MAGEC3Q8TD91 643 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 SREK1Q8WXA9 508 aaKnown RBP12.72□□□□□ -0.37
PHGDH-218ENST00000641491 CXorf40BQ96DE9 158 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 LINGO1Q96FE5 620 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 SCYL1Q96KG9 808 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 BIRC8Q96P09 236 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 TMEM109Q9BVC6 243 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 TRIM54Q9BYV2 358 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 DPEP2Q9H4A9 486 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 COG4Q9H9E3 785 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 CAB39LQ9H9S4 337 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 TMEM74BQ9NUR3 256 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 PLXND1Q9Y4D7 1925 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 CACNA1IQ9P0X4 2223 aa12.72□□□□□ -0.37
PHGDH-218ENST00000641491 NUMA1Q14980 2115 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 A0A096LPK6 155 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 C10orf142B7Z368 130 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 COPEO14579 308 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 PHGDHO43175 533 aaKnown RBP12.71□□□□□ -0.37
PHGDH-218ENST00000641491 ZW10O43264 779 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 ATP8B1O43520 1251 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 SDC3O75056 442 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-218ENST00000641491 HIST1H2ADP20671 130 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CYP2A7P20853 494 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 GABRB3P28472 473 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CCT5P48643 541 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CDKN2DP55273 166 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 TAS2R39P59534 338 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CTBSQ01459 385 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 EIF2B5Q13144 721 aaKnown RBP12.71□□□□□ -0.37
PHGDH-218ENST00000641491 NFE2L1Q14494 772 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CCDC6Q16204 474 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 HLA-BQ31612 363 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 PIM3Q86V86 326 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CPNE9Q8IYJ1 553 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 FAM46DQ8NEK8 389 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CFAP61Q8NHU2 1237 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 C1orf216Q8TAB5 229 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 NAT14Q8WUY8 206 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 ANKRD7Q92527 254 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 DHRS4Q9BTZ2 278 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 DUSP23Q9BVJ7 150 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 TMEM168Q9H0V1 697 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 NMRAL1Q9HBL8 299 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 GPR27Q9NS67 375 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 CTNNAL1Q9UBT7 734 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 DHRS7Q9Y394 339 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 SLCO1B1Q9Y6L6 691 aa12.71□□□□□ -0.37
PHGDH-218ENST00000641491 ZFHX4Q86UP3 3567 aa12.71□□□□□ -0.38
PHGDH-218ENST00000641491 MAP1BP46821 2468 aaKnown RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 OR5K4A6NMS3 321 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 B4DGG1 531 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 LRP3O75074 770 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CATP04040 527 aaKnown RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CCDC166P0CW27 439 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 ENGP17813 658 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CD9P21926 228 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 AOAHP28039 575 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CCR7P32248 378 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CA5AP35218 305 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 PREPP48147 710 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 RPIAP49247 311 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CLCNKAP51800 687 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 ATP6V0D1P61421 351 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 IL9RQ01113 521 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms