RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SERPINA9Q86WD7 417 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 C1orf54Q8WWF1 131 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 KIAA1143Q96AT1 154 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-232ENST00000640653 ARHGAP9Q9BRR9 750 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 EFHD1Q9BUP0 239 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 HEBP2Q9Y5Z4 205 aa24.63■■□□□ 1.53
VEGFA-232ENST00000640653 ATRXP46100 2492 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 E7EVH7 732 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 POLBP06746 335 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 CDKN1CP49918 316 aaPredicted RBP24.62■■□□□ 1.53
VEGFA-232ENST00000640653 KRT33BQ14525 404 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 DUS1LQ6P1R4 473 aaKnown RBP24.62■■□□□ 1.53
VEGFA-232ENST00000640653 ZNF662Q6ZS27 426 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 SPDYE1Q8NFV5 336 aaPredicted RBP24.62■■□□□ 1.53
VEGFA-232ENST00000640653 OR52K1Q8NGK4 314 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 UBXN4Q92575 508 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 EXTL1Q92935 676 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 OR6C1Q96RD1 312 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 SEMA4CQ9C0C4 833 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 KIR3DX1Q9H7L2 352 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 ETNK1Q9HBU6 452 aa24.62■■□□□ 1.53
VEGFA-232ENST00000640653 OR5K3A6NET4 321 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 MROH6A6NGR9 719 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 DLGAP3O95886 979 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 NELFEP18615 380 aaKnown RBP24.61■■□□□ 1.53
VEGFA-232ENST00000640653 NDUFS1P28331 727 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 SH3BP2P78314 561 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 ABHD18Q0P651 414 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 LAMB3Q13751 1172 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 MAP7Q14244 749 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 CAPRIN2Q6IMN6 1127 aaKnown RBP24.61■■□□□ 1.53
VEGFA-232ENST00000640653 ZNF449Q6P9G9 518 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 PPP1R21Q6ZMI0 780 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 OOSP2Q86WS3 158 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 ESX1Q8N693 406 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 CCDC89Q8N998 374 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 RMDN2Q96LZ7 410 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 CD180Q99467 661 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 SLC12A9Q9BXP2 914 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 GPN2Q9H9Y4 310 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-232ENST00000640653 LZTFL1Q9NQ48 299 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 SEMA5BQ9P283 1151 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 SLC24A2Q9UI40 661 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 ATMQ13315 3056 aa24.61■■□□□ 1.53
VEGFA-232ENST00000640653 SUN1O94901 812 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 GSTM1P09488 218 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 PSMA3P25788 255 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 MSNP26038 577 aaKnown RBP24.6■■□□□ 1.53
VEGFA-232ENST00000640653 PPP1CAP62136 330 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 CYP4F2P78329 520 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 GSTM4Q03013 218 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 SNX1Q13596 522 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 LINC00303Q3SY05 128 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 DNTTIP2Q5QJE6 756 aaKnown RBP24.6■■□□□ 1.53
VEGFA-232ENST00000640653 ARMC6Q6NXE6 501 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 TIPARPQ7Z3E1 657 aaKnown RBP24.6■■□□□ 1.53
VEGFA-232ENST00000640653 RASGRP3Q8IV61 690 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 LILRA3Q8N6C8 439 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-232ENST00000640653 ULBP3Q9BZM4 244 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 COG4Q9H9E3 785 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 HRASLS2Q9NWW9 162 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 PAK5Q9P286 719 aa24.6■■□□□ 1.53
VEGFA-232ENST00000640653 ZNF891A8MT65 544 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-232ENST00000640653 IFRD1O00458 451 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-232ENST00000640653 NRDCO43847 1150 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 AP2A2O94973 939 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 PRSS56P0CW18 603 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 DBN1Q16643 649 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 ZNF605Q86T29 641 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 KMT5CQ86Y97 462 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 LRRC8AQ8IWT6 810 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 PIANPQ8IYJ0 282 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 SIDT2Q8NBJ9 832 aaKnown RBP24.59■■□□□ 1.53
VEGFA-232ENST00000640653 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.59■■□□□ 1.537e-6■■■■■ 27.5
VEGFA-232ENST00000640653 SLC45A3Q96JT2 553 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 SLC41A2Q96JW4 573 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 RAB6BQ9NRW1 208 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 SMARCAL1Q9NZC9 954 aa24.59■■□□□ 1.53
VEGFA-232ENST00000640653 IGHV5-51A0A0C4DH38 117 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 UBA6A0AVT1 1052 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-232ENST00000640653 CCDC78A2IDD5 438 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 HEATR9A2RTY3 570 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 TLCD2A6NGC4 264 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 QSOX1O00391 747 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 FGF5P12034 268 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 NSG1P42857 185 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 ARL4DP49703 201 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 RPA4Q13156 261 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 SEMA5AQ13591 1074 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 ITIH4Q14624 930 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 CCNG2Q16589 344 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 TBR1Q16650 682 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 CCDC38Q502W7 563 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 PPP1R3BQ86XI6 285 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 MAIP1Q8WWC4 291 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 MAP3K3Q99759 626 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 PDE7BQ9NP56 450 aa24.58■■□□□ 1.53
VEGFA-232ENST00000640653 LOC101059948A0A1B0GTJ6 334 aa24.57■■□□□ 1.52
VEGFA-232ENST00000640653 OR6C74A6NCV1 312 aa24.57■■□□□ 1.52
VEGFA-232ENST00000640653 CD151P48509 253 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms