RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 DDTLA6NHG4 134 aaPredicted RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 B4E171 279 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 SOCS6O14544 535 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 NCAM2O15394 837 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 CCNT1O60563 726 aaKnown RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 PQBP1O60828 265 aaKnown RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 TFAP2AP05549 437 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 PCNAP12004 261 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 ACTN1P12814 892 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 SELEP16581 610 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 TRIM21P19474 475 aaKnown RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 MSH3P20585 1137 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 RBMS1P29558 406 aaKnown RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 TSPAN7P41732 249 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 ENTPD1P49961 510 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 PRKAA2P54646 552 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 TMEM50BP56557 158 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 CSNK2A1P68400 391 aaPredicted RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 UGT3A2Q3SY77 523 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 FAM174BQ3ZCQ3 159 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 CT47A1Q5JQC4 288 aaPredicted RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 PLEKHS1Q5SXH7 462 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 RGMBQ6NW40 437 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 NHLRC1Q6VVB1 395 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 LRRTM4Q86VH4 590 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 CSNK2A3Q8NEV1 391 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 IPO4Q8TEX9 1081 aaKnown RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 HSPH1Q92598 858 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 CAPNS2Q96L46 248 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 QRFPRQ96P65 431 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 MYADMQ96S97 322 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 PRPF18Q99633 342 aaKnown RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 PAXXQ9BUH6 204 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 TFB2MQ9H5Q4 396 aaKnown RBP0.03□□□□□ -2.4
CCDC7-215ENST00000639629 SAGE1Q9NXZ1 904 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 MAN1B1Q9UKM7 699 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 RIPOR2Q9Y4F9 1068 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 LRP4O75096 1905 aa0.03□□□□□ -2.4
CCDC7-215ENST00000639629 TBC1D3DA0A087WVF3 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3IA0A087WXS9 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3EA0A087X179 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3KA0A087X1G2 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 LOC102723996A0A087X1L8 192 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3BA6NDS4 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3FA6NER0 549 aaPredicted RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3LB9A6J9 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 G3V2L1 256 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ICAM1P05362 532 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 CSN3P07498 182 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3HP0C7X1 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 MYOD1P15172 320 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 IL11P20809 199 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 SPRR2EP22531 72 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 SPRR2BP35325 72 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 SPRR2AP35326 72 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 CRYBA2P53672 197 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TAS2R40P59535 323 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 EFNB1P98172 346 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 PAX8Q06710 450 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ARHGAP29Q52LW3 1261 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3GQ6DHY5 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3CQ6IPX1 549 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 CCDC149Q6ZUS6 474 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 PIWIL4Q7Z3Z4 852 aaKnown RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 C5orf24Q7Z6I8 188 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TADA2BQ86TJ2 420 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ZC3HC1Q86WB0 502 aaKnown RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 KRTAP11-1Q8IUC1 163 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 DHX40Q8IX18 779 aaKnown RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TBC1D3Q8IZP1 549 aaPredicted RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ZBTB2Q8N680 514 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 HORMAD2Q8N7B1 307 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 SECTM1Q8WVN6 248 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 PIGBQ92521 554 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ANKRD9Q96BM1 317 aaPredicted RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ZBTB10Q96DT7 871 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TMEM19Q96HH6 336 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 UNC45AQ9H3U1 944 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 MTHFD2LQ9H903 347 aaPredicted RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ENTPD7Q9NQZ7 604 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 SERINC1Q9NRX5 453 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ZNF446Q9NWS9 450 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 TAGLN3Q9UI15 199 aa0.03□□□□□ -2.41
CCDC7-215ENST00000639629 MRPS18CQ9Y3D5 142 aaKnown RBP0.03□□□□□ -2.41
CCDC7-215ENST00000639629 ZNF840PA6NDX5 716 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 NPIPB15A6NHN6 443 aaPredicted RBP0.02□□□□□ -2.41
CCDC7-215ENST00000639629 AQP12BA6NM10 295 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 KIF28PB7ZC32 967 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 BCAT2O15382 392 aaPredicted RBP0.02□□□□□ -2.41
CCDC7-215ENST00000639629 LINC01565O15544 149 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 CSDE1O75534 798 aaKnown RBP0.02□□□□□ -2.41
CCDC7-215ENST00000639629 TIPRLO75663 272 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 RASSF9O75901 435 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 MELTFP08582 738 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 ITIH1P19827 911 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 FUSP35637 526 aaKnown RBP eCLIP0.02□□□□□ -2.41
CCDC7-215ENST00000639629 ITGA8P53708 1063 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 ICA1Q05084 483 aa0.02□□□□□ -2.41
CCDC7-215ENST00000639629 FGFBP1Q14512 234 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms