RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 LRRC3Q9BY71 257 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 C3orf14Q9HBI5 128 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 WASH6PQ9NQA3 447 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 PGAP2Q9UHJ9 254 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 OR2B3O76000 313 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ANXA6P08133 673 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ATICP31939 592 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ARL4AP40617 200 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ORC1Q13415 861 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ASAH1Q13510 395 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 RCAN2Q14206 197 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 TECRLQ5HYJ1 363 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 KIAA0319Q5VV43 1072 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 TIGD7Q6NT04 549 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 TMEM65Q6PI78 240 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 KIF18BQ86Y91 864 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 PHYKPLQ8IUZ5 450 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 DTX3Q8N9I9 347 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 CNIH3Q8TBE1 160 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ISG20Q96AZ6 181 aaKnown RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 CCDC115Q96NT0 180 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 C11orf84Q9BUA3 381 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ELOVL4Q9GZR5 314 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 AKTIPQ9H8T0 292 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ERVMER34-1Q9H9K5 563 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ORC6Q9Y5N6 252 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 MAGED1Q9Y5V3 778 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ARPC4-TTLL3A0A0A6YYG9 625 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 OR6C70A6NIJ9 312 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 A8MX80 341 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 SPATA31C2B4DYI2 1134 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 PSMD3O43242 534 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 SEC14L5O43304 696 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 FADS2O95864 444 aaKnown RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 RPLP0P05388 317 aaKnown RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 NR3C2P08235 984 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 HOXC6P09630 235 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 SLURP2P0DP57 97 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 CYP3A5P20815 502 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 CHMP24386 653 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 TGFBR1P36897 503 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 HUNKP57058 714 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 S100A12P80511 92 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 IL5RAQ01344 420 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 RHAGQ02094 409 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 RAB6CQ53S08 254 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 RABL3Q5HYI8 236 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ARMC4Q5T2S8 1044 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 BSPRYQ5W0U4 402 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 VWA5B2Q8N398 1253 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 OR52K1Q8NGK4 314 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ITFG1Q8TB96 612 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 KLHL6Q8WZ60 621 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 TTLL2Q9BWV7 592 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 RAB6CQ9H0N0 254 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 PPA2Q9H2U2 334 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 GSTO2Q9H4Y5 243 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 IFT22Q9H7X7 185 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 FBRSL1Q9HCM7 1045 aaKnown RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 ENTPD7Q9NQZ7 604 aa11.84□□□□□ -0.51
CAPN3-221ENST00000638141 NUFIP1Q9UHK0 495 aaKnown RBP11.84□□□□□ -0.51
CAPN3-221ENST00000638141 A8MT66 165 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 PI15O43692 258 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 ZNF623O75123 536 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 PGLSO95336 258 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 FGF4P08620 206 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 ATF6P18850 670 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 SOX6P35712 828 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 ABCG1P45844 678 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 YBX1P67809 324 aaKnown RBP11.83□□□□□ -0.52
CAPN3-221ENST00000638141 JAG1P78504 1218 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 RAPSNQ13702 412 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 TBCEQ15813 527 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-221ENST00000638141 FAM83EQ2M2I3 478 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 ARMCX4Q5H9R4 360 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 SLC46A3Q7Z3Q1 461 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 IFNEQ86WN2 208 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 GPALPP1Q8IXQ4 340 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 ZNF567Q8N184 647 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 GLB1L3Q8NCI6 653 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-221ENST00000638141 L3HYPDHQ96EM0 354 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 LPIN3Q9BQK8 851 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 SLC22A4Q9H015 551 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 GABARAPL1Q9H0R8 117 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 GORASP2Q9H8Y8 452 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 LTB4R2Q9NPC1 389 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 TMEFF2Q9UIK5 374 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-221ENST00000638141 LEF1Q9UJU2 399 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-221ENST00000638141 FIS1Q9Y3D6 152 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 PCDHB14Q9Y5E9 798 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 CITO14578 2027 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 NFIBO00712 420 aa11.83□□□□□ -0.52
CAPN3-221ENST00000638141 CA12O43570 354 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms