RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CCR10P46092 362 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 RHBDL3P58872 404 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CNTN2Q02246 1040 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 LRIF1Q5T3J3 769 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 LYSMD3Q7Z3D4 306 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 DNAJB7Q7Z6W7 309 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CRYBG2Q8N1P7 616 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 OR6K6Q8NGW6 343 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 PHB2Q99623 299 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF184Q99676 751 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SLC5A7Q9GZV3 580 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 FN3KQ9H479 309 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 MARCH7Q9H992 704 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 PIGBOS1A0A0B4J2F0 54 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 OR2AT4A6NND4 320 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 AP5Z1O43299 807 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 BUD23O43709 281 aaKnown RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CPN2P22792 545 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 GADD45AP24522 165 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ACTR1BP42025 376 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CD47Q08722 323 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 WDR45BQ5MNZ6 344 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ARHGAP40Q5TG30 622 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 LINGO2Q7L985 606 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 MRPL41Q8IXM3 137 aaKnown RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 TC2NQ8N9U0 490 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SPERTQ8NA61 448 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 OR6K2Q8NGY2 324 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 PIWIL2Q8TC59 973 aaKnown RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 C15orf40Q8WUR7 153 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 HOPXQ9BPY8 73 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SP140LQ9H930 580 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 FAM105AQ9NUU6 356 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 C14orf105Q9NVL8 296 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ALG5Q9Y673 324 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 F8VP50 259 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 AGPSO00116 658 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 COQ9O75208 318 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 UBOX5O94941 541 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 RARRES1P49788 294 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CCR8P51685 355 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 HERV-K104P61576 105 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CDK18Q07002 472 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CXCL9Q07325 125 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 HSPB3Q12988 150 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 RABL6Q3YEC7 729 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 KIAA0319Q5VV43 1072 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SMARCD3Q6STE5 483 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ARL9Q6T311 187 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CERS6Q6ZMG9 384 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 OTOP3Q7RTS5 596 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 TMC3Q7Z5M5 1100 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 TBC1D21Q8IYX1 336 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 OR7D4Q8NG98 312 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 OR2L2Q8NH16 312 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SLC22A8Q8TCC7 542 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ING5Q8WYH8 240 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 DPF2Q92785 391 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 NEDD4LQ96PU5 975 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ABCG8Q9H221 673 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 MUC13Q9H3R2 512 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 PTGES2Q9H7Z7 377 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 GDF3Q9NR23 364 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF180Q9UJW8 692 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 HPSEQ9Y251 543 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 TIMM8BQ9Y5J9 83 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 AP4B1Q9Y6B7 739 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 B4DGG1 531 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 EPHB6O15197 1021 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 VEGFDO43915 354 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 NME6O75414 186 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 IFNW1P05000 195 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ALPPP05187 535 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 C8GP07360 202 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CHMP24386 653 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 KIR3DL1P43629 444 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 NAGLUP54802 743 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 MAXP61244 160 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 MTFR2Q6P444 385 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 DEFB132Q7Z7B7 95 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 LAS2Q8IYD9 372 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 TOP6BLQ8N6T0 577 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 LRRC20Q8TCA0 184 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SLC25A36Q96CQ1 311 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF670Q9BS34 389 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CCDC28BQ9BUN5 200 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 ASPNQ9BXN1 380 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 DUSP16Q9BY84 665 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SLC32A1Q9H598 525 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 KCNQ5Q9NR82 932 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 POLR3BQ9NW08 1133 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-209ENST00000635750 CLDND1Q9NY35 253 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 SPATA7Q9P0W8 599 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 B4GALT7Q9UBV7 327 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 DERAQ9Y315 318 aa5.49□□□□□ -1.53
SCN1A-209ENST00000635750 NT5C1B-RDH14C9J2C7 533 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 WNT10BO00744 389 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RPP40O75818 363 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 FABP3P05413 133 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ITGAVP06756 1048 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms