RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 FAM149B1Q96BN6 582 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 MOAP1Q96BY2 351 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 INTS12Q96CB8 462 aaKnown RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 MMABQ96EY8 250 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF414Q96IQ9 312 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF354BQ96LW1 612 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 TIGD1Q96MW7 591 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 WDFY2Q96P53 400 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 QRFPRQ96P65 431 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 NUDCD1Q96RS6 583 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 SH3GL2Q99962 352 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 TUBA1CQ9BQE3 449 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 HAUS8Q9BT25 410 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 POLR3CQ9BUI4 534 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 GLIS2Q9BZE0 524 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 BARHL1Q9BZE3 327 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 SMARCAD1Q9H4L7 1026 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 KAT14Q9H8E8 782 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 EVA1AQ9H8M9 152 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 UBTD1Q9HAC8 227 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 RANGRFQ9HD47 186 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 MKKSQ9NPJ1 570 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ASAH2Q9NR71 780 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 DIAPH3Q9NSV4 1193 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ACSS1Q9NUB1 689 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ABCF3Q9NUQ8 709 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 PTTG2Q9NZH5 202 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF224Q9NZL3 707 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 EHD2Q9NZN4 543 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 STK26Q9P289 416 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 PDP2Q9P2J9 529 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 TINAGQ9UJW2 476 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 FBXL2Q9UKC9 423 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 RALYQ9UKM9 306 aaKnown RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 INTS6Q9UL03 887 aaKnown RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 CORO1CQ9ULV4 474 aaPredicted RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 TCF19Q9Y242 345 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 AMDHD2Q9Y303 409 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 JRKLQ9Y4A0 524 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 RAI2Q9Y5P3 530 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 KCNE2Q9Y6J6 123 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 CAPN7Q9Y6W3 813 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ADCY9O60503 1353 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 LRPPRCP42704 1394 aaKnown RBP1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 PIK3R4Q99570 1358 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 RAB3GAP2Q9H2M9 1393 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 KMT2EQ8IZD2 1858 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 KIF26AQ9ULI4 1882 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CRB1P82279 1406 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SMCHD1A6NHR9 2005 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CKAP5Q14008 2032 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 NPIPB15A6NHN6 443 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MYO1GB0I1T2 1018 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PTGES3LE9PB15 166 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM72CH0Y354 149 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 J3KRW8 73 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 M0QZ24 198 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CAPN9O14815 690 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 LDLRAD4O15165 306 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CLIC2O15247 247 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 TNFSF14O43557 240 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SH3BP5O60239 455 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 HS6ST1O60243 411 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 WDR1O75083 606 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RFPL2O75678 378 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 KRTAP5-8O75690 187 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CCNDBP1O95273 360 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 TBX18O95935 607 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CD4P01730 458 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 EIF2S1P05198 315 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PRSS1P07477 247 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 LINC00271P0C7V0 271 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RARGP13631 454 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ITGA2P17301 1181 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ANXA7P20073 488 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MAOAP21397 527 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CHMP24386 653 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 EPHA2P29317 976 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 EPHA8P29322 1005 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ICAM3P32942 547 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 MAN1A1P33908 653 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 USP8P40818 1118 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RGS2P41220 211 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 HSD17B4P51659 736 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 DRG2P55039 364 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 HNRNPH2P55795 449 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 TAS2R38P59533 333 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SEC61BP60468 96 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ARF3P61204 181 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 EEF1A1P68104 462 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 IRX6P78412 446 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ARF1P84077 181 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 PPP2R2BQ00005 443 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 ECT2LQ008S8 904 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SETQ01105 290 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CEBPZQ03701 1054 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 RELQ04864 619 aaPredicted RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC20A2Q08357 652 aa1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 CSTF3Q12996 717 aaKnown RBP1.07□□□□□ -2.24
SMARCB1-209ENST00000635578 IKQ13123 557 aaPredicted RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms