RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 FCRL4Q96PJ5 515 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PPP1R10Q96QC0 940 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 MMS19Q96T76 1030 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ZBTB18Q99592 522 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SEMA3CQ99985 751 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 C19orf43Q9BQ61 176 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 MACROD1Q9BQ69 325 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 LBHD1Q9BQE6 289 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ZSCAN5AQ9BUG6 496 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ELOVL1Q9BW60 279 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CINPQ9BW66 212 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 GATA5Q9BWX5 397 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CCDC134Q9H6E4 229 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 LRRC19Q9H756 370 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 EXO5Q9H790 373 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SYNDIG1Q9H7V2 258 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 FBRSL1Q9HCM7 1045 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SLC22A11Q9NSA0 550 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ABHD10Q9NUJ1 306 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TMLHEQ9NVH6 421 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TRNAU1APQ9NX07 287 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SH3BP4Q9P0V3 963 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ARPP21Q9UBL0 812 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SLC25A10Q9UBX3 287 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF70Q9UC06 446 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SERGEFQ9UGK8 458 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ATP6V1HQ9UI12 483 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CNOT7Q9UIV1 285 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KCND3Q9UK17 655 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 DNPEPQ9ULA0 475 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ST3GAL5Q9UNP4 418 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 NUDCQ9Y266 331 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 R3HDM2Q9Y2K5 976 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CBY1Q9Y3M2 126 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 MAB21L2Q9Y586 359 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PCDHB2Q9Y5E7 798 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KCNE2Q9Y6J6 123 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 DHX29Q7Z478 1369 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ARHGEF17Q96PE2 2063 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 A0A1W2PN81 502 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 FAM230AA0A1W2PPH8 454 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SMIM30A4D0T7 59 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 GSAPA4D1B5 854 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 TRIM49BA6NDI0 452 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 C3orf70A6NLC5 250 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 LRRIQ3A6PVS8 624 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 F8WDY8 70 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CCDC188H7C350 402 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 QSOX1O00391 747 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SLC33A1O00400 549 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 TSPAN4O14817 238 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 OGTO15294 1046 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 KRT86O43790 486 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 STRNO43815 780 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 GUCY1B2O75343 617 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SURF6O75683 361 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 AKAP3O75969 853 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 MT-CO3P00414 261 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 EIF2S1P05198 315 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 URODP06132 367 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SERPINF2P08697 491 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SPARCP09486 303 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CCDC192P0DO97 292 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 UROSP10746 265 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 THRBP10828 461 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 RALBP11234 206 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 PRPS2P11908 318 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 ANPEPP15144 967 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 HOXB6P17509 224 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CYP2A7P20853 494 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 AGAP20933 346 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 GPD1P21695 349 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 HNRNPA2B1P22626 353 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 MCM3P25205 808 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 PSMA5P28066 241 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 PCGF2P35227 344 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 MAP2K2P36507 400 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CHRNA7P36544 502 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CAPGP40121 348 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 MAGEA1P43355 309 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CDKN1BP46527 198 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 ME1P48163 572 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF84P51523 738 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CAPZA1P52907 286 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SNU13P55769 128 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 NME5P56597 212 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 TAS2R50P59544 299 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 ACTR3P61158 418 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 RPL7AP62424 266 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 TPM4P67936 248 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 OTUD4Q01804 1114 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 TNFRSF17Q02223 184 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 LCP2Q13094 533 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SCGB2A2Q13296 93 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF273Q14593 569 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 LARS2Q15031 903 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 CHRNA6Q15825 494 aa2.93□□□□□ -1.94
PSPC1-208ENST00000635562 EZH2Q15910 746 aaKnown RBP2.93□□□□□ -1.94
PSPC1-208ENST00000635562 SGCBQ16585 318 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms