RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 NRIP3Q9NQ35 241 aa5□□□□□ -1.61
TRAPPC9-216ENST00000634178 ABCF3Q9NUQ8 709 aa5□□□□□ -1.61
TRAPPC9-216ENST00000634178 CRNNQ9UBG3 495 aaPredicted RBP5□□□□□ -1.61
TRAPPC9-216ENST00000634178 LAMB1P07942 1786 aa5□□□□□ -1.61
TRAPPC9-216ENST00000634178 CKAP5Q14008 2032 aa5□□□□□ -1.61
TRAPPC9-216ENST00000634178 IBTKQ9P2D0 1353 aaPredicted RBP5□□□□□ -1.61
TRAPPC9-216ENST00000634178 HEG1Q9ULI3 1381 aa5□□□□□ -1.61
TRAPPC9-216ENST00000634178 FLT1P17948 1338 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ATXN2Q99700 1313 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 SIPA1L3O60292 1781 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 KDM3BQ7LBC6 1761 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 EDDM13A0A1B0GTR0 161 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 URADA6NGE7 173 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 EIF4E1BA6NMX2 242 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 HS3ST1O14792 307 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ITM2AO43736 263 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 AKAP8O43823 692 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 PRAMEF11O60813 436 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 SLU7O95391 586 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 NUDT3O95989 172 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ARSBP15848 533 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 TCEA1P23193 301 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 NR2F2P24468 414 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 KRT2P35908 639 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ACVRL1P37023 503 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 KCNJ4P48050 445 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 GMPSP49915 693 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 RALGDSQ12967 914 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 SLC39A6Q13433 755 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 DLG2Q15700 870 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ODF2Q5BJF6 829 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 MANEAQ5SRI9 462 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 TMEM198Q66K66 360 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 KCTD18Q6PI47 426 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 PCSK4Q6UW60 755 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 OLFM4Q6UX06 510 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 LDB1Q86U70 411 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 IQCA1Q86XH1 822 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 CEP97Q8IW35 865 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ZBTB8BQ8NAP8 495 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ENGASEQ8NFI3 743 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 CRAMP1Q96RY5 1269 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 POLDIP3Q9BY77 421 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ISCUQ9H1K1 167 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 PRO3102Q9H379 93 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 XAB2Q9HCS7 855 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 KRCC1Q9NPI7 259 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 MBNL1Q9NR56 388 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 TRMT1Q9NXH9 659 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 TUBA8Q9NY65 449 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 HAO2Q9NYQ3 351 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 LARSQ9P2J5 1176 aaKnown RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 COG5Q9UP83 839 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 RAI2Q9Y5P3 530 aa4.99□□□□□ -1.61
TRAPPC9-216ENST00000634178 VCANP13611 3396 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 KCNU1A8MYU2 1149 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 VWA5AO00534 786 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 ASAP2O43150 1006 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 SPINT2O43291 252 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 PPIP5K2O43314 1243 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 PLRG1O43660 514 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 MOSPD3O75425 235 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 VNN2O95498 520 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 BCL10O95999 233 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 EGFP01133 1207 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 ATP5BP06576 529 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 CYC1P08574 325 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 NAGAP17050 411 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 RPS12P25398 132 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 OAS2P29728 719 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 HNRNPH1P31943 449 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 STX2P32856 288 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 WASHC2DQ5SRD0 308 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 C10orf25Q5T742 122 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 OTUD1Q5VV17 481 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 ZDHHC20Q5W0Z9 365 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 FRG2Q64ET8 278 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 HIST2H2BCQ6DN03 193 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 HIST2H2BDQ6DRA6 164 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 ANKRD54Q6NXT1 300 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 DCLRE1AQ6PJP8 1040 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 DNAJB7Q7Z6W7 309 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 YTHDF3Q7Z739 585 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 MAML2Q8IZL2 1156 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 MAGEC3Q8TD91 643 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 TEKT4Q8WW24 435 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 DPF1Q92782 380 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 APBB2Q92870 758 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 SECISBP2LQ93073 1101 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 SPACA9Q96E40 222 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 FER1L6-AS2Q96M78 137 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 NEK1Q96PY6 1258 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 KXD1Q9BQD3 176 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 THUMPD3Q9BV44 507 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 QTRT1Q9BXR0 403 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 NYXQ9GZU5 481 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 PCDHGA5Q9Y5G8 931 aa4.98□□□□□ -1.61
TRAPPC9-216ENST00000634178 COX11Q9Y6N1 276 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms