RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 EPS8L2Q9H6S3 715 aa13.48□□□□□ -0.25
SNX1-214ENST00000625244 NT5MQ9NPB1 228 aa13.48□□□□□ -0.25
SNX1-214ENST00000625244 PKD2L2Q9NZM6 624 aa13.48□□□□□ -0.25
SNX1-214ENST00000625244 ADAM22Q9P0K1 906 aa13.48□□□□□ -0.25
SNX1-214ENST00000625244 PCM1Q15154 2024 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 ATRQ13535 2644 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 TCRBV5S1A1TA0A578 114 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 CCDC66A2RUB6 948 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 RGSL1A5PLK6 1076 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 OR6C74A6NCV1 312 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 E7EQ34 232 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 VEGFDO43915 354 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 UNGP13051 313 aaPredicted RBP13.47□□□□□ -0.25
SNX1-214ENST00000625244 MST1P26927 711 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 DNAJA1P31689 397 aaKnown RBP13.47□□□□□ -0.25
SNX1-214ENST00000625244 PREPP48147 710 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 SMSP52788 366 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 IST1P53990 364 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 CDR2Q01850 454 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 PPP6R3Q5H9R7 873 aaPredicted RBP13.47□□□□□ -0.25
SNX1-214ENST00000625244 MARC1Q5VT66 337 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 KLHDC7AQ5VTJ3 777 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 C1orf189Q5VU69 101 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 ALS2CLQ60I27 953 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 MEX3BQ6ZN04 569 aaKnown RBP13.47□□□□□ -0.25
SNX1-214ENST00000625244 LINC00696Q6ZRV3 163 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 CARFQ8N187 725 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX1-214ENST00000625244 ADAMTS18Q8TE60 1221 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 NRGNQ92686 78 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 GLYATL1Q969I3 302 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 EID2BQ96D98 161 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 PEBP4Q96S96 227 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 PCDHB18PQ96TA0 734 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 C17orf62Q9BQA9 187 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 CXXC4Q9H2H0 198 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 SYTL2Q9HCH5 934 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 DLL4Q9NR61 685 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 ANO10Q9NW15 660 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 GPN3Q9UHW5 284 aaPredicted RBP13.47□□□□□ -0.25
SNX1-214ENST00000625244 SERTAD3Q9UJW9 196 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 PSMD13Q9UNM6 376 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 CDYLQ9Y232 598 aa13.47□□□□□ -0.25
SNX1-214ENST00000625244 RPH3AQ9Y2J0 694 aaPredicted RBP13.47□□□□□ -0.25
SNX1-214ENST00000625244 RTTNQ86VV8 2226 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 F8VZ95 297 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 FANCGO15287 622 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 CDK14O94921 469 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 LMAN1P49257 510 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 LTBQ06643 244 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 ITKQ08881 620 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 FOXD4Q12950 439 aaPredicted RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 DPYSQ14117 519 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 GALNT3Q14435 633 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 SLC9A5Q14940 896 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 C3AR1Q16581 482 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 STX1AQ16623 288 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.46□□□□□ -0.25
SNX1-214ENST00000625244 ANKRD20A8PQ5CZ79 823 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 CT47A1Q5JQC4 288 aaPredicted RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 FAAH2Q6GMR7 532 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 ARMC6Q6NXE6 501 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 RBM43Q6ZSC3 357 aaKnown RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 GPR26Q8NDV2 337 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 LPCAT1Q8NF37 534 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 TREX2Q9BQ50 279 aaPredicted RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 SNRNP25Q9BV90 132 aaKnown RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 TDRD1Q9BXT4 1180 aaKnown RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 CWC15Q9P013 229 aaKnown RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 SEC14L3Q9UDX4 400 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 NDOR1Q9UHB4 597 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 PCSK1NQ9UHG2 260 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 RWDD2AQ9UIY3 292 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 TINAGQ9UJW2 476 aa13.46□□□□□ -0.25
SNX1-214ENST00000625244 CFAP20Q9Y6A4 193 aaKnown RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 FN1P02751 2386 aaKnown RBP13.46□□□□□ -0.25
SNX1-214ENST00000625244 ANKRD12Q6UB98 2062 aa13.46□□□□□ -0.26
SNX1-214ENST00000625244 EIF3CLB5ME19 914 aaKnown RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 WISP2O76076 250 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 GFPT2O94808 682 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 KLHL18O94889 574 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 HBQ1P09105 142 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 MSL3P1P0C860 447 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 UCHL3P15374 230 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 POLR2CP19387 275 aaPredicted RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 CDH3P22223 829 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 NSFP46459 744 aaKnown RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 DSC2Q02487 901 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 DPCR1Q3MIW9 517 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 ERMARDQ5T6L9 678 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 IRAK1BP1Q5VVH5 260 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 MRPL14Q6P1L8 145 aaKnown RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 DNAJC24Q6P3W2 148 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 ISLR2Q6UXK2 745 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 FAM83HQ6ZRV2 1179 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms