RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CSTF2P33240 577 aaKnown RBP eCLIP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 TTPAP49638 278 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 MAPK10P53779 464 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 ETF1P62495 437 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 GSTM4Q03013 218 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 SQSTM1Q13501 440 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 TRA2AQ13595 282 aaKnown RBP eCLIP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 BOP1Q14137 746 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 BRD3Q15059 726 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 IZUMO3Q5VZ72 239 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 DUS1LQ6P1R4 473 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 WDR74Q6RFH5 385 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 SYT10Q6XYQ8 523 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 LDB1Q86U70 411 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 CAND1Q86VP6 1230 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 PLXDC1Q8IUK5 500 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 MPP5Q8N3R9 675 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 LILRA3Q8N6C8 439 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 GPR150Q8NGU9 434 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 ELMO1Q92556 727 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 FGF11Q92914 225 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 SLCO2A1Q92959 643 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 INSM2Q96T92 566 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 PRSS21Q9Y6M0 314 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 COLEC10Q9Y6Z7 277 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 DMXL2Q8TDJ6 3036 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 MAGEB16A2A368 324 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 HGSO14964 777 aaPredicted RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 PFDN6O15212 129 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 FANCGO15287 622 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 DXOO77932 396 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 ITGA2BP08514 1039 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 PREPP48147 710 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 PCBP4P57723 403 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 ERVPABLB-1P60509 514 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 CFHR1Q03591 330 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 SEMA3AQ14563 771 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 C16orf72Q14CZ0 275 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 RNASEH2BQ5TBB1 312 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 ARMC3Q5W041 872 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 PTRHD1Q6GMV3 140 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 KLHL35Q6PF15 583 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 LRRC69Q6ZNQ3 347 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 SYDE1Q6ZW31 735 aaPredicted RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 JPH3Q8WXH2 748 aaPredicted RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 ZNF669Q96BR6 464 aaPredicted RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 RMDN2Q96LZ7 410 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 FERD3LQ96RJ6 166 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 KRT12Q99456 494 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 WDR70Q9NW82 654 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 MARCH4Q9P2E8 410 aaPredicted RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 HEBP2Q9Y5Z4 205 aa13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
PCDHGC3-208ENST00000622836 CACNA1BQ00975 2339 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 UBA6A0AVT1 1052 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 GOLGA8KD6RF30 607 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 PRMT5O14744 637 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 LIN7AO14910 233 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 TTI1O43156 1089 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 TLX3O43711 291 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 ITGB6P18564 788 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 ITIH1P19827 911 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 NDUFS1P28331 727 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 MLLT3P42568 568 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 PTGIRP43119 386 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 RPA4Q13156 261 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 THOC5Q13769 683 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 DNAJC21Q5F1R6 531 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 TMEM164Q5U3C3 297 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 KIAA0930Q6ICG6 404 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 IRGCQ6NXR0 463 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 FAM129CQ86XR2 697 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 AGBL5Q8NDL9 886 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 C16orf45Q96MC5 204 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 TGM7Q96PF1 710 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 TRIM51Q9BSJ1 452 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 ASCL3Q9NQ33 180 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 GNPTGQ9UJJ9 305 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 RPS6KL1Q9Y6S9 549 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
PCDHGC3-208ENST00000622836 FAM237BA0A1B0GVD1 139 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 CAPN5O15484 640 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 RASSF9O75901 435 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 PDHA2P29803 388 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 CAPZBP47756 277 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 CSE1LP55060 971 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 GFERP55789 205 aa13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 EIF3BP55884 814 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-208ENST00000622836 PLOD1Q02809 727 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms