RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TFPIP10646 304 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PROZP22891 400 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PSMA3P25788 255 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PIK3R1P27986 724 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 CYP4F3Q08477 520 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 NFATC2Q13469 925 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 C1orf61Q13536 156 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PHF19Q5T6S3 580 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 GPRC6AQ5T6X5 926 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PIK3R6Q5UE93 754 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 C15orf39Q6ZRI6 1047 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 BEND5Q7L4P6 421 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 TXNDC5Q8NBS9 432 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 LMX1AQ8TE12 382 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 CENPTQ96BT3 561 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 ITCHQ96J02 903 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PSKH2Q96QS6 385 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 NPAS2Q99743 824 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 EBPLQ9BY08 206 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 EPB41L4BQ9H329 900 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SPAG4Q9NPE6 437 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 EXD2Q9NVH0 621 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 MAT2BQ9NZL9 334 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 NUP188Q5SRE5 1749 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 HAS3O00219 553 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SAP18O00422 153 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 LAMTOR5O43504 91 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 FYNP06241 537 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 CDH5P33151 784 aaPredicted RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 CCR3P51677 355 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SLC13A2Q13183 592 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 C1DQ13901 141 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 KPNB1Q14974 876 aaKnown RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 NRF1Q16656 503 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 ANXA8L1Q5VT79 327 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 MLIPQ5VWP3 458 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SLC9A4Q6AI14 798 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 GK5Q6ZS86 529 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 ZMIZ2Q8NF64 920 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 PRICKLE1Q96MT3 831 aaPredicted RBP9.11□□□□□ -0.95
GGA3-223ENST00000621870 GPR174Q9BXC1 333 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 NMUR2Q9GZQ4 415 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 ZNF180Q9UJW8 692 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 CNTN6Q9UQ52 1028 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 AP3M1Q9Y2T2 418 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 SH3GLB1Q9Y371 365 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 GLI3P10071 1580 aa9.11□□□□□ -0.95
GGA3-223ENST00000621870 RFXAPO00287 272 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 GRID2O43424 1007 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 PEX1O43933 1283 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 KRT33AO76009 404 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 STATHP02808 62 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TCF3P15923 654 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 FECHP22830 423 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 CST5P28325 142 aaPredicted RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 PXNP49023 591 aaPredicted RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 ELAVL3Q14576 367 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 OASLQ15646 514 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 ERN2Q76MJ5 926 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 BNIPLQ7Z465 357 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ADHFE1Q8IWW8 467 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 DHRSXQ8N5I4 330 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 OR4A15Q8NGL6 344 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 MAGEE2Q8TD90 523 aaPredicted RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 NCSTNQ92542 709 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 KLHL4Q9C0H6 718 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 MRPS30Q9NP92 439 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 ADAP2Q9NPF8 381 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 SAGE1Q9NXZ1 904 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ZNF229Q9UJW7 825 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ICE1Q9Y2F5 2266 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 BTAF1O14981 1849 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 MYH1P12882 1939 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ACADSP16219 412 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ZNF30P17039 623 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 PSMB9P28065 219 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 RPL6Q02878 288 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 ZNF542PQ5EBM4 170 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ZNF544Q6NX49 715 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 DEF8Q6ZN54 512 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TAS1R1Q7RTX1 841 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 KBTBD6Q86V97 674 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ARMC8Q8IUR7 673 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TCEAL8Q8IYN2 117 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 OR4E2Q8NGC2 313 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 RP9Q8TA86 221 aaKnown RBP9.1□□□□□ -0.95
GGA3-223ENST00000621870 MIPEPQ99797 713 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TBC1D10AQ9BXI6 508 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 MTG2Q9H4K7 406 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 ITM2CQ9NQX7 267 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 SEMA3GQ9NS98 782 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 RPS6KA6Q9UK32 745 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 LINC00854A0A1B0GVQ3 168 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TCRBV21S2A2A0A5A6 115 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 K7EPI3 171 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TGFB1P01137 390 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 TNFP01375 233 aa9.1□□□□□ -0.95
GGA3-223ENST00000621870 AHSGP02765 367 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms