RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 DNTTIP2Q5QJE6 756 aaKnown RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 TEDDM1Q5T9Z0 273 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 RNF187Q5TA31 235 aaPredicted RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 CAPRIN2Q6IMN6 1127 aaKnown RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 ZNF549Q6P9A3 640 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 SPRED1Q7Z699 444 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 ZNF761Q86XN6 746 aaPredicted RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 SPNS2Q8IVW8 549 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 OR6C4Q8NGE1 309 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 GSDMBQ8TAX9 411 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 CALML6Q8TD86 181 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 PYROXD1Q8WU10 500 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 C9orf72Q96LT7 481 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 RMDN2Q96LZ7 410 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 FAM167BQ9BTA0 163 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 WWP1Q9H0M0 922 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 VPS37BQ9H9H4 285 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 CPNE7Q9UBL6 633 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 ACSL5Q9ULC5 683 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 OR5K4A6NMS3 321 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 NTN3O00634 580 aaPredicted RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 B4GAT1O43505 415 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 OPA1O60313 960 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 NIPSNAP2O75323 286 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 FTH1P02794 183 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 GSTM1P09488 218 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 FMO4P31512 558 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 PDX1P52945 283 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 GSTM4Q03013 218 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 RPE65Q16518 533 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 UBAP2Q5T6F2 1119 aaKnown RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 CNSTQ6PJW8 725 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 CAPN12Q6ZSI9 719 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 ERMP1Q7Z2K6 904 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 LRRC6Q86X45 466 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 VRK3Q8IV63 474 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 CHCHD4Q8N4Q1 142 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 ELMO1Q92556 727 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 INSM2Q96T92 566 aaPredicted RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 FOXP3Q9BZS1 431 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 LRRC4CQ9HCJ2 640 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 SMYD2Q9NRG4 433 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 EVA1BQ9NVM1 165 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 GALPQ9UBC7 116 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 GNPTGQ9UJJ9 305 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 PSAT1Q9Y617 370 aa14.01□□□□□ -0.17
CBWD3-217ENST00000621474 CFAP20Q9Y6A4 193 aaKnown RBP14.01□□□□□ -0.17
CBWD3-217ENST00000621474 LIN7AO14910 233 aaPredicted RBP14□□□□□ -0.17
CBWD3-217ENST00000621474 HYAL3O43820 417 aaPredicted RBP14□□□□□ -0.17
CBWD3-217ENST00000621474 GPC4O75487 556 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 PIAS1O75925 651 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 TRIM16O95361 564 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 AHSGP02765 367 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 ESR1P03372 595 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 RHOXF2BP0C7M4 288 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 SLC2A4P14672 509 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 AOAHP28039 575 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 MAGEA4P43358 317 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 BOP1Q14137 746 aaKnown RBP14□□□□□ -0.17
CBWD3-217ENST00000621474 BRD3Q15059 726 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 CDCP2Q5VXM1 449 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 DUS1LQ6P1R4 473 aaKnown RBP14□□□□□ -0.17
CBWD3-217ENST00000621474 TMPRSS9Q7Z410 1059 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 GALNT7Q86SF2 657 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 SLC9B2Q86UD5 537 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 CCDC25Q86WR0 208 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 RHOXF2Q9BQY4 288 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 FAM129AQ9BZQ8 928 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 POT1Q9NUX5 634 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 PCDHB1Q9Y5F3 818 aa14□□□□□ -0.17
CBWD3-217ENST00000621474 TCRBV9S1A1TA0A576 114 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 RHPN2P1A8MT19 583 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 MTHFD1P11586 935 aaKnown RBP13.99□□□□□ -0.17
CBWD3-217ENST00000621474 PKMP14618 531 aaKnown RBP13.99□□□□□ -0.17
CBWD3-217ENST00000621474 ACADLP28330 430 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 OR1D5P58170 312 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 CCL7P80098 99 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 TIAL1Q01085 375 aaKnown RBP eCLIP13.99□□□□□ -0.17
CBWD3-217ENST00000621474 CFHR1Q03591 330 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 RPA4Q13156 261 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 HES3Q5TGS1 186 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 PTRHD1Q6GMV3 140 aaKnown RBP13.99□□□□□ -0.17
CBWD3-217ENST00000621474 KIAA0408Q6ZU52 694 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 MARCH9Q86YJ5 346 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 RELL1Q8IUW5 271 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 Q8N9G6 341 aaPredicted RBP13.99□□□□□ -0.17
CBWD3-217ENST00000621474 GIMAP7Q8NHV1 300 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 IFT81Q8WYA0 676 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 FAM136AQ96C01 138 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 SLC30A3Q99726 388 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 MCMBPQ9BTE3 642 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 VPS9D1Q9Y2B5 631 aa13.99□□□□□ -0.17
CBWD3-217ENST00000621474 AKAP13Q12802 2813 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 IGHV1OR21-1A0A087WYE8 117 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 CXorf49A8MYA2 514 aaPredicted RBP13.98□□□□□ -0.17
CBWD3-217ENST00000621474 RPLP0P05388 317 aaKnown RBP13.98□□□□□ -0.17
CBWD3-217ENST00000621474 SLC35G4P0C7Q5 338 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 CDK4P11802 303 aa13.98□□□□□ -0.17
CBWD3-217ENST00000621474 SPINK2P20155 84 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms