RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 NAPRTQ6XQN6 538 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 C3orf62Q6ZUJ4 267 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 ERMP1Q7Z2K6 904 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 CNTN4Q8IWV2 1026 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 TRIM48Q8IWZ4 208 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 C2CD4AQ8NCU7 369 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-245ENST00000621399 LKAAEAR1Q8TD35 194 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 CXorf40BQ96DE9 158 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 PANX3Q96QZ0 392 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 FMO2Q99518 471 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 CCDC3Q9BQI4 270 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 MOCS1Q9NZB8 636 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 ZNF624Q9P2J8 865 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-245ENST00000621399 CPNE7Q9UBL6 633 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 PCNX2A6NKB5 2137 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 PPM1DO15297 605 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 DKK1O94907 266 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 VIPP01282 170 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 GSTA2P09210 222 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 PKMP14618 531 aaKnown RBP18.19■□□□□ 0.5
CIRBP-245ENST00000621399 PNLIPP16233 465 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 XRCC1P18887 633 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-245ENST00000621399 CHRM3P20309 590 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 CCR7P32248 378 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 FASLGP48023 281 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 PREPP48147 710 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 LEPRP48357 1165 aaKnown RBP18.19■□□□□ 0.5
CIRBP-245ENST00000621399 HHEXQ03014 270 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 RPA4Q13156 261 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 DHRS13Q6UX07 377 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 KIAA0408Q6ZU52 694 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 Q8N9G6 341 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-245ENST00000621399 AVL9Q8NBF6 648 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 CCDC68Q9H2F9 335 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 SARS2Q9NP81 518 aaKnown RBP18.19■□□□□ 0.5
CIRBP-245ENST00000621399 IMP3Q9NV31 184 aaKnown RBP18.19■□□□□ 0.5
CIRBP-245ENST00000621399 ZFATQ9P243 1243 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 SLC17A6Q9P2U8 582 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 RABGEF1Q9UJ41 708 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 NFU1Q9UMS0 254 aa18.19■□□□□ 0.5
CIRBP-245ENST00000621399 ZW10O43264 779 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 NIPSNAP2O75323 286 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 SLU7O95391 586 aaKnown RBP18.18■□□□□ 0.5
CIRBP-245ENST00000621399 APOA4P06727 396 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 PDHA2P29803 388 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 ECHS1P30084 290 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 SLC19A1P41440 591 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 CSE1LP55060 971 aaKnown RBP18.18■□□□□ 0.5
CIRBP-245ENST00000621399 GPX6P59796 221 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 UBE2IP63279 158 aaKnown RBP18.18■□□□□ 0.5
CIRBP-245ENST00000621399 PLOD1Q02809 727 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-245ENST00000621399 HSPA14Q0VDF9 509 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 TMED2Q15363 201 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 RPE65Q16518 533 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-245ENST00000621399 CNSTQ6PJW8 725 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-245ENST00000621399 ASZ1Q8WWH4 475 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 TMEM159Q96B96 161 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 SH3KBP1Q96B97 665 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 C12orf66Q96MD2 445 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 INSM2Q96T92 566 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-245ENST00000621399 SLC38A3Q99624 504 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 SYNDIG1Q9H7V2 258 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 LRRC4CQ9HCJ2 640 aa18.18■□□□□ 0.5
CIRBP-245ENST00000621399 TCRBV9S1A1TA0A576 114 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 SLC5A10A0PJK1 596 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 E5RI56 91 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 IFRD1O00458 451 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-245ENST00000621399 KPNA5O15131 536 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 OPA1O60313 960 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 AHSGP02765 367 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 MTHFD1P11586 935 aaKnown RBP18.17■□□□□ 0.5
CIRBP-245ENST00000621399 AOAHP28039 575 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 ALDH4A1P30038 563 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 CAPRIN2Q6IMN6 1127 aaKnown RBP18.17■□□□□ 0.5
CIRBP-245ENST00000621399 ZNF549Q6P9A3 640 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 OTOAQ7RTW8 1153 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 ZNF438Q7Z4V0 828 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 ZNF761Q86XN6 746 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-245ENST00000621399 ADAMTS14Q8WXS8 1223 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 CDKL2Q92772 493 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 FAM136AQ96C01 138 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 RMDN2Q96LZ7 410 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-245ENST00000621399 OR52A5Q9H2C5 316 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 POT1Q9NUX5 634 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 CFAP20Q9Y6A4 193 aaKnown RBP18.17■□□□□ 0.5
CIRBP-245ENST00000621399 COMMD10Q9Y6G5 202 aa18.17■□□□□ 0.5
CIRBP-245ENST00000621399 PRAMEF33A0A0G2JMD5 474 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 SPAG6O75602 509 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 RPLP0P05388 317 aaKnown RBP18.16■□□□□ 0.5
CIRBP-245ENST00000621399 GABRB3P28472 473 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 GPR3P46089 330 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 CD151P48509 253 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 OR1D5P58170 312 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 TUBB4BP68371 445 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 CCL7P80098 99 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 FOXC1Q12948 553 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 KRT33BQ14525 404 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms