RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ELMO1Q92556 727 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 LPGAT1Q92604 370 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 RMDN2Q96LZ7 410 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 C12orf66Q96MD2 445 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 INSM2Q96T92 566 aaPredicted RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 WDR83Q9BRX9 315 aaKnown RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 LRRC1Q9BTT6 524 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 CARD6Q9BX69 1037 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 TSSK1BQ9BXA7 367 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 OR52A5Q9H2C5 316 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 SLC40A1Q9NP59 571 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 IMP3Q9NV31 184 aaKnown RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 ZC3H7BQ9UGR2 993 aaKnown RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 GNPTGQ9UJJ9 305 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 ATXN7L1Q9ULK2 861 aaPredicted RBP17.89■□□□□ 0.45
LITAF-220ENST00000620789 CHMP2BQ9UQN3 213 aa17.89■□□□□ 0.45
LITAF-220ENST00000620789 PRAMEF33A0A0G2JMD5 474 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 CPNE6O95741 557 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 MTHFD1P11586 935 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 EPHA4P54764 986 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 ADARP55265 1226 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 EIF3BP55884 814 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 PDIA2Q13087 525 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 SQSTM1Q13501 440 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 CAMK2BQ13554 666 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 BOP1Q14137 746 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 CLPPQ16740 277 aaPredicted RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 MAP9Q49MG5 647 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 HP1BP3Q5SSJ5 553 aaPredicted RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 PTRHD1Q6GMV3 140 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 CAPRIN2Q6IMN6 1127 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 TMEM26Q6ZUK4 368 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 KCNMB4Q86W47 210 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 UNC5BQ8IZJ1 945 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 OR10G6Q8NH81 332 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 CALML6Q8TD86 181 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 GRAMD1AQ96CP6 724 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 FAM167BQ9BTA0 163 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 PLAC1Q9HBJ0 212 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 EPB41L5Q9HCM4 733 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 INTS10Q9NVR2 710 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 VPS9D1Q9Y2B5 631 aa17.88■□□□□ 0.45
LITAF-220ENST00000620789 CFAP20Q9Y6A4 193 aaKnown RBP17.88■□□□□ 0.45
LITAF-220ENST00000620789 SLC5A10A0PJK1 596 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 IQCF5A8MTL0 148 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 DUX1O43812 170 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 S1PR4O95977 384 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 ITGB6P18564 788 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 PDHA2P29803 388 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 SLC1A2P43004 574 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 PREPP48147 710 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 SLC7A5Q01650 507 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 PLOD1Q02809 727 aaPredicted RBP17.87■□□□□ 0.45
LITAF-220ENST00000620789 CAV1Q03135 178 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 CTBP1Q13363 440 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 GPR18Q14330 331 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 SYTL3Q4VX76 610 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 HSP90AA5PQ58FG0 334 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 CTSL3PQ5NE16 218 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 NKAIN2Q5VXU1 208 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 STEAP4Q687X5 459 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 UNC5AQ6ZN44 842 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 TMPRSS9Q7Z410 1059 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 PIM3Q86V86 326 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 DENND6AQ8IWF6 608 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 NOA1Q8NC60 698 aaKnown RBP17.87■□□□□ 0.45
LITAF-220ENST00000620789 LKAAEAR1Q8TD35 194 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 GATA6Q92908 595 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 ART4Q93070 314 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 CFAP36Q96G28 342 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 AHCYL2Q96HN2 611 aaKnown RBP17.87■□□□□ 0.45
LITAF-220ENST00000620789 BIRC8Q96P09 236 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 PANX3Q96QZ0 392 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 TBC1D10AQ9BXI6 508 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 EPB41L1Q9H4G0 881 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 RDH14Q9HBH5 336 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 PCDHB1Q9Y5F3 818 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 ENTPD2Q9Y5L3 495 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 CHD8Q9HCK8 2581 aa17.87■□□□□ 0.45
LITAF-220ENST00000620789 ASPMQ8IZT6 3477 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 IFRD1O00458 451 aaPredicted RBP17.86■□□□□ 0.45
LITAF-220ENST00000620789 ESR1P03372 595 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 FMO4P31512 558 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 CCR7P32248 378 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 CD151P48509 253 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 PLTPP55058 493 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 FASTKD3Q14CZ7 662 aaKnown RBP17.86■□□□□ 0.45
LITAF-220ENST00000620789 BRD3Q15059 726 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 TRADDQ15628 312 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 ZNF789Q5FWF6 425 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 DUS1LQ6P1R4 473 aaKnown RBP17.86■□□□□ 0.45
LITAF-220ENST00000620789 NAPRTQ6XQN6 538 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 USP53Q70EK8 1073 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 B3GNT8Q7Z7M8 397 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 PDZD3Q86UT5 571 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 ANKMY2Q8IV38 441 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 ZBED8Q8IZ13 594 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 KRT222Q8N1A0 295 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 CEP112Q8N8E3 955 aa17.86■□□□□ 0.45
LITAF-220ENST00000620789 FBXO36Q8NEA4 188 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms