RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZNF106Q9H2Y7 1883 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 UNC13CQ8NB66 2214 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PTPRQQ9UMZ3 2332 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TLN1Q9Y490 2541 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TRBV5-4A0A0C4DH59 114 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LY6G6EA0A0G2JKS1 128 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 IQANK1A0A1B0GTG1 560 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PRR19A6NJB7 356 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 AGAP14A8MT82 685 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 F8W8V4 182 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TRIM38O00635 465 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GIPC1O14908 333 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LIN7AO14910 233 aaPredicted RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CASC3O15234 703 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 STX7O15400 261 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 VEGFDO43915 354 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 DNAJC6O75061 913 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 MTX2O75431 263 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 EML2O95834 649 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SHBGP04278 402 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ANXA6P08133 673 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GSTM1P09488 218 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 MYF5P13349 255 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CTSEP14091 401 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 NQO1P15559 274 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GLB1P16278 677 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 KRT15P19012 456 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CALRP27797 417 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 NMBRP28336 390 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 FOXN2P32314 431 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SPAM1P38567 509 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ARCN1P48444 511 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ACADVLP49748 655 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CLCNKAP51800 687 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CTSCP53634 463 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ARL4CP56559 192 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ERVPABLB-1P60509 514 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SRP54P61011 504 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ELF3P78545 371 aaPredicted RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CDK16Q00536 496 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GSTM4Q03013 218 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CDH17Q12864 832 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ILF3Q12906 894 aaKnown RBP eCLIP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 DNAJC3Q13217 504 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SEMA3AQ14563 771 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 FASTKD3Q14CZ7 662 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 NR0B2Q15466 257 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SEPT7Q16181 437 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CMPK2Q5EBM0 449 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 WASHC2DQ5SRD0 308 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 UBAP2Q5T6F2 1119 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GPRC6AQ5T6X5 926 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TSTD2Q5T7W7 516 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 IZUMO3Q5VZ72 239 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 FBXW10Q5XX13 1052 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 OGFOD3Q6PK18 319 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 DOK6Q6PKX4 331 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ENPP7Q6UWV6 458 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 UNQ6494/PRO21346Q6UXR6 183 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 MARK2Q7KZI7 788 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ADGRG6Q86SQ4 1221 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LINC00523Q86TU6 105 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 NRROSQ86YC3 692 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 HID1Q8IV36 788 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF547Q8IVP9 402 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PPIL6Q8IXY8 311 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LRRC34Q8IZ02 419 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PHACTR4Q8IZ21 702 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 UNC5BQ8IZJ1 945 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PDIK1LQ8N165 341 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ARHGAP24Q8N264 748 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TRAM1L1Q8N609 369 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 BEND7Q8N7W2 519 aaPredicted RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LSM14AQ8ND56 463 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF548Q8NEK5 533 aaPredicted RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 RAB3IL1Q8TBN0 382 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GPBAR1Q8TDU6 330 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GATA6Q92908 595 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 PEX13Q92968 403 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GLYATL1Q969I3 302 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 HDAC10Q969S8 669 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SH3KBP1Q96B97 665 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 KLHL29Q96CT2 875 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LRRC39Q96DD0 335 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 NXPE2Q96DL1 559 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 CDKN2AIPNLQ96HQ2 116 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LRRC37BQ96QE4 947 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 RANBP9Q96S59 729 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SIKE1Q9BRV8 207 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 LRRC61Q9BV99 259 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 KIFC1Q9BW19 673 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 SPATA16Q9BXB7 569 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 GSDMCQ9BYG8 508 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ZCCHC2Q9C0B9 1178 aaKnown RBP5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM168Q9H0V1 697 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 ABCG4Q9H172 646 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 OR2AG1Q9H205 316 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 KCNK9Q9NPC2 374 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 TREX1Q9NSU2 369 aa5.17□□□□□ -1.58
SHMT1-211ENST00000618902 NLE1Q9NVX2 485 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms