RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 GTF2H4Q92759 462 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 FATE1Q969F0 183 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PSMG2Q969U7 264 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 LRGUKQ96M69 825 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TRAF4Q9BUZ4 470 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 KIFC1Q9BW19 673 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TSSK1BQ9BXA7 367 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 FSD1LQ9BXM9 530 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 GON7Q9BXV9 100 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 C20orf27Q9GZN8 174 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PPARGC1AQ9UBK2 798 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SLC39A10Q9ULF5 831 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 AP4S1Q9Y587 144 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 NYNRINQ9P2P1 1898 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SDK1Q7Z5N4 2213 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PTPRDP23468 1912 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MYLKQ15746 1914 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TSC2P49815 1807 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 C17orf113A0A1B0GUU1 675 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SYN3O14994 580 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RFPL1O75677 317 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TCEA3O75764 348 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 GJB5O95377 273 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 POP4O95707 220 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 C8BP07358 591 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PSKH1P11801 424 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MAGP20916 626 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 GLDCP23378 1020 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PSMA3P25788 255 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ACVRL1P37023 503 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RPL34P49207 117 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ALDH7A1P49419 539 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PRKAA2P54646 552 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ALDH18A1P54886 795 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 DAB2P98082 770 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MPP1Q00013 466 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ACY1Q03154 408 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TLE2Q04725 743 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SLC10A7Q0GE19 358 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SEMA5AQ13591 1074 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TRIM60Q495X7 471 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ZFP69Q49AA0 526 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 Q5BKY6 102 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RALGPS1Q5JS13 557 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RARS2Q5T160 578 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ATAD3CQ5T2N8 411 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RBM20Q5T481 1227 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 N4BP2L1Q5TBK1 243 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 VWA5B1Q5TIE3 1220 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 FUT10Q6P4F1 479 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CHSY1Q86X52 802 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PLD6Q8N2A8 252 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ZBTB44Q8NCP5 570 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 IGSF8Q969P0 613 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 NCLNQ969V3 563 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 HMCESQ96FZ2 354 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SH3YL1Q96HL8 342 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CYP4F11Q9HBI6 524 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ABCC13Q9NSE7 274 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 BFARQ9NZS9 450 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MARCH2Q9P0N8 246 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PCDHA11Q9Y5I1 949 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 NLRC5Q86WI3 1866 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TP53BP1Q12888 1972 aaPredicted RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 THSD7BQ9C0I4 1608 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 A0A0D9SEW6 157 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 OR51F1A6NGY5 319 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 CHURC1-FNTBB4DL54 471 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 PITPNM1O00562 1244 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 TNFRSF10BO14763 440 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 AREL1O15033 823 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 TLR5O60602 858 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 ALDOAP04075 364 aaKnown RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 PDGFAP04085 211 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 HLA-DQB2P05538 268 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 POLBP06746 335 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 MYL2P10916 166 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 BMP1P13497 986 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 HOXB3P14651 431 aaPredicted RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 GJA1P17302 382 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 KELP23276 732 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 YWHAQP27348 245 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 PIK3R1P27986 724 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 CSTF2P33240 577 aaKnown RBP eCLIP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 CD86P42081 329 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 RPS24P62847 133 aaKnown RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 DSC2Q02487 901 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 BST1Q10588 318 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 PMS2P3Q13401 168 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 SMAD4Q13485 552 aaKnown RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 NRF1Q16656 503 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 TEX44Q53QW1 395 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 ESRP1Q6NXG1 681 aaKnown RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 RPS27LQ71UM5 84 aaKnown RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 PDZD4Q76G19 769 aaPredicted RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 OTOP2Q7RTS6 562 aa5.49□□□□□ -1.53
CPNE4-214ENST00000617767 PIWIL3Q7Z3Z3 882 aaKnown RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 PSTKQ8IV42 348 aaKnown RBP5.49□□□□□ -1.53
CPNE4-214ENST00000617767 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms