RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	TASP1	Q9H6P5	420 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	NIPAL2	Q9H841	368 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	IL1RL2	Q9HB29	575 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	GBA2	Q9HCG7	927 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	GJD2	Q9UKL4	321 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	ANKRD6	Q9Y2G4	727 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	AUP1	Q9Y679	476 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185		H3BQ06	376 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	STX7	O15400	261 aa	Known RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CD36	P16671	472 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MSH3	P20585	1137 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	IGFBP6	P24592	240 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	ETV6	P41212	452 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MAP2K4	P45985	399 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CDH6	P55285	790 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	POLR2G	P62487	172 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CRADD	P78560	199 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	PRSS42	Q7Z5A4	293 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	ACOT1	Q86TX2	421 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	KIF18B	Q86Y91	864 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	TMEM40	Q8WWA1	233 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	DNAJB3	Q8WWF6	145 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	ATXN7L3B	Q96GX2	97 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	TSNARE1	Q96NA8	513 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	TINF2	Q9BSI4	451 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	MAGEB5	Q9BZ81	275 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.41	□□□□□ -0.58
TP53-222	ENST00000617185	GPATCH2L	Q9NWQ4	482 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	CMTM6	Q9NX76	183 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	TBC1D24	Q9ULP9	559 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	NDUFAF1	Q9Y375	327 aa		11.41	□□□□□ -0.58
TP53-222	ENST00000617185	DFNA5	O60443	496 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ENDOD1	O94919	500 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	FTH1	P02794	183 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ERVK-10	P10266	1014 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	FSHR	P23945	695 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	MIP	P30301	263 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ISL1	P61371	349 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	MVK	Q03426	396 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	BAMBI	Q13145	260 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	TIGD3	Q6B0B8	471 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	RETREG3	Q86VR2	466 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	PLD5	Q8N7P1	536 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	C7orf57	Q8NEG2	295 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ZMIZ2	Q8NF64	920 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	OR9I1	Q8NGQ6	314 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	BPIFB1	Q8TDL5	484 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	TMBIM1	Q969X1	311 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	TMEM176A	Q96HP8	235 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	LRCH3	Q96II8	777 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	RNF145	Q96MT1	663 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	SEPHS2	Q99611	448 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	MRPL45	Q9BRJ2	306 aa	Known RBP	11.4	□□□□□ -0.58
TP53-222	ENST00000617185	B3GNT5	Q9BYG0	378 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	NGRN	Q9NPE2	291 aa	Known RBP	11.4	□□□□□ -0.58
TP53-222	ENST00000617185	FAM105A	Q9NUU6	356 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	USP18	Q9UMW8	372 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	USP22	Q9UPT9	525 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	SCN1A	P35498	2009 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ANK1	P16157	1881 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	TRUB2	O95900	331 aa	Known RBP	11.4	□□□□□ -0.58
TP53-222	ENST00000617185	TCF3	P15923	654 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	POU3F3	P20264	500 aa	Predicted RBP	11.4	□□□□□ -0.58
TP53-222	ENST00000617185	GTF2A2	P52657	109 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	BLVRA	P53004	296 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	RABGGTB	P53611	331 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	SLC12A2	P55011	1212 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	GPR85	P60893	370 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	BTBD16	Q32M84	506 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	PYCR3	Q53H96	274 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ARMC4	Q5T2S8	1044 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	OR6B2	Q6IFH4	312 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	SCYL2	Q6P3W7	929 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ZNF600	Q6ZNG1	722 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	RBM23	Q86U06	439 aa	Known RBP	11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ZDHHC13	Q8IUH4	622 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	PLPP6	Q8IY26	295 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	CCNYL1	Q8N7R7	359 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	NETO2	Q8NC67	525 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ELMO1	Q92556	727 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	SCYL1	Q96KG9	808 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	OPALIN	Q96PE5	141 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	OR2A14	Q96R47	310 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	BEX2	Q9BXY8	128 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.4	□□□□□ -0.58
TP53-222	ENST00000617185	RNF39	Q9H2S5	420 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	MEAF6	Q9HAF1	191 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	C14orf119	Q9NWQ9	140 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	GTSE1	Q9NYZ3	720 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	MAP10	Q9P2G4	905 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	ERVK-18	Q9QC07	812 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	TSPAN16	Q9UKR8	245 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	MAN2B2	Q9Y2E5	1009 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	TPRKB	Q9Y3C4	175 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	NME7	Q9Y5B8	376 aa		11.4	□□□□□ -0.58
TP53-222	ENST00000617185	PLXNA1	Q9UIW2	1896 aa		11.4	□□□□□ -0.59
TP53-222	ENST00000617185		E5RI56	91 aa		11.39	□□□□□ -0.59
TP53-222	ENST00000617185	UPK1A	O00322	258 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms