RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 C3orf58Q8NDZ4 430 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 BEX1Q9HBH7 125 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 JPH1Q9HDC5 661 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 CLEC4AQ9UMR7 237 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 NALCNQ8IZF0 1738 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 MEGF6O75095 1541 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 HACD1B0YJ81 288 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 KIAA0513O60268 411 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 VPS4BO75351 444 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 ASS1P00966 412 aaKnown RBP13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 RAPSNQ13702 412 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 C1orf220Q5T0J3 134 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 GPR158Q5T848 1215 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 STX12Q86Y82 276 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 PLCZ1Q86YW0 608 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 C4orf19Q8IY42 314 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 SRFBP1Q8NEF9 429 aaKnown RBP13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 OR52J3Q8NH60 311 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 ZNF516Q92618 1163 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 MAB21L2Q9Y586 359 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 PTGDR2Q9Y5Y4 395 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 STON1Q9Y6Q2 735 aa13.38□□□□□ -0.27
PPP4R3B-205ENST00000616288 INMT-MINDY4F8WBC2 141 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 MITFO75030 526 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 SEC22BO75396 215 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 AQP1P29972 269 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 GRAPQ13588 217 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 ARMCX2Q7L311 632 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 LDB1Q86U70 411 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 FAM217AQ8IXS0 508 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 GRAPLQ8TC17 118 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 RNF139Q8WU17 664 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 SLC30A3Q99726 388 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 GSDMCQ9BYG8 508 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 COPZ2Q9P299 210 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 MGAT4AQ9UM21 535 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 AP3M1Q9Y2T2 418 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 AAR2Q9Y312 384 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 AXIN1O15169 862 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 OGTO15294 1046 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 KCNK2O95069 426 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 SIX3O95343 332 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 GGT5P36269 586 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 TNFSF9P41273 254 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 PIK3CGP48736 1102 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 PTPN5P54829 565 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 IFITM3Q01628 133 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 SLX4IPQ5VYV7 408 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 BTBD8Q5XKL5 378 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 ZNF366Q8N895 744 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 TP53I13Q8NBR0 393 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 COQ8AQ8NI60 647 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 ZNF490Q9ULM2 529 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 PKP3Q9Y446 797 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 MYH14Q7Z406 1995 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 TRAV6A0A075B6T7 132 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 RAB19A4D1S5 217 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 G3V2L1 256 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 DFNA5O60443 496 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 C4BPAP04003 597 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 POU2F1P14859 743 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 OR4D2P58180 307 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 PCDH1Q08174 1060 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 FAPQ12884 760 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 FAM160B1Q5W0V3 765 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 ZNF621Q6ZSS3 439 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 TXNDC5Q8NBS9 432 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 SGTBQ96EQ0 304 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 LRCH3Q96II8 777 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 TRMOQ9BU70 441 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 B3GNT5Q9BYG0 378 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 MOCS1Q9NZB8 636 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 HCN3Q9P1Z3 774 aa13.37□□□□□ -0.27
PPP4R3B-205ENST00000616288 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 AKR7A2O43488 359 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 KPNA6O60684 536 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 CLEC2LP0C7M8 214 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 COL6A1P12109 1028 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 CBLP22681 906 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 DIO3P55073 304 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 CDC42P60953 191 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 RPL38P63173 70 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 DSG2Q14126 1118 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 METTL2BQ6P1Q9 378 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 ZNF549Q6P9A3 640 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 DNAJA4Q8WW22 397 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 MUL1Q969V5 352 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 METTL2AQ96IZ6 378 aaKnown RBP13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 ZNF641Q96N77 438 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 RNF121Q9H920 327 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 SCPEP1Q9HB40 452 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 LTB4R2Q9NPC1 389 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 SLAMF7Q9NQ25 335 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 CLN6Q9NWW5 311 aa13.36□□□□□ -0.27
PPP4R3B-205ENST00000616288 TMPRSS11EQ9UL52 423 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms