RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 CERS6Q6ZMG9 384 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 FAM92BQ6ZTR7 304 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 KLHL7Q8IXQ5 586 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 KRT222Q8N1A0 295 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 LMNTD1Q8N9Z9 388 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 OR4L1Q8NH43 312 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 LINC00615Q96LM1 132 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 ZNF578Q96N58 590 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 PWWP2AQ96N64 755 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 FCRL3Q96P31 734 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 TRIM51Q9BSJ1 452 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 CCM2Q9BSQ5 444 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 OR52A5Q9H2C5 316 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 STN1Q9H668 368 aaKnown RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 APMAPQ9HDC9 416 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 HOMER3Q9NSC5 361 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 DNMT3AQ9Y6K1 912 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 A0A087WV48 116 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CFAP99D6REC4 459 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CAPN5O15484 640 aaPredicted RBP12.37□□□□□ -0.43
CSTF1-208ENST00000613138 GAS8O95995 478 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 ITGA2BP08514 1039 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 RALBP11234 206 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 AMD1P17707 334 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 MAGEA6P43360 314 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 EPHA4P54764 986 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 PCBP4P57723 403 aaKnown RBP12.37□□□□□ -0.43
CSTF1-208ENST00000613138 SH3BP2P78314 561 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 PRAMEP78395 509 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 SQSTM1Q13501 440 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 COL9A2Q14055 689 aaPredicted RBP12.37□□□□□ -0.43
CSTF1-208ENST00000613138 ZNF789Q5FWF6 425 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CAPRIN2Q6IMN6 1127 aaKnown RBP12.37□□□□□ -0.43
CSTF1-208ENST00000613138 ARHGAP22Q7Z5H3 698 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CLEC14AQ86T13 490 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 FAM129CQ86XR2 697 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 VRK3Q8IV63 474 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 UNC5BQ8IZJ1 945 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 HM13Q8TCT9 377 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 ART4Q93070 314 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 ZNF514Q96K75 400 aaPredicted RBP12.37□□□□□ -0.43
CSTF1-208ENST00000613138 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
CSTF1-208ENST00000613138 C19orf43Q9BQ61 176 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 THSD1Q9NS62 852 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CATSPERZQ9NTU4 200 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 POT1Q9NUX5 634 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 BFARQ9NZS9 450 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CIDEBQ9UHD4 219 aa12.37□□□□□ -0.43
CSTF1-208ENST00000613138 CD3EAPO15446 510 aaKnown RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 KLK10O43240 276 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 VAPBO95292 243 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 HALP42357 657 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 NPY2RP49146 381 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 FNTAP49354 379 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 ERVPABLB-1P60509 514 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 TLE3Q04726 772 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 PRKG2Q13237 762 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 CLN3Q13286 438 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 BOP1Q14137 746 aaKnown RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 MSS51Q4VC12 460 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 FASTKD1Q53R41 847 aaKnown RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 ANKS6Q68DC2 871 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 IRGCQ6NXR0 463 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 WDR74Q6RFH5 385 aaPredicted RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 IGF2-ASQ6U949 168 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 C4orf22Q6V702 233 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 VASH2Q86V25 355 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 BMPERQ8N8U9 685 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 NAT8LQ8N9F0 302 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 KCNE4Q8WWG9 221 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 ELMO1Q92556 727 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 SH3KBP1Q96B97 665 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 FAM136AQ96C01 138 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 KIFC1Q9BW19 673 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 IL22Q9GZX6 179 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 XKR8Q9H6D3 395 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 UCK1Q9HA47 277 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 PDP2Q9P2J9 529 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 RIMKLBQ9ULI2 386 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 SOX13Q9UN79 622 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 LHX6Q9UPM6 363 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 B3GALT1Q9Y5Z6 326 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 IGSF10Q6WRI0 2623 aa12.36□□□□□ -0.43
CSTF1-208ENST00000613138 MN1Q10571 1320 aaPredicted RBP12.36□□□□□ -0.43
CSTF1-208ENST00000613138 TEX51A0A1B0GUA7 166 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 KRT87PA6NCN2 255 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 CES2O00748 559 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 RRP8O43159 456 aaKnown RBP12.35□□□□□ -0.43
CSTF1-208ENST00000613138 KCNJ13O60928 360 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 C9P02748 559 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
CSTF1-208ENST00000613138 TPBGLP0DKB5 382 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms