RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TGFBIQ15582 683 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 INTS11Q5TA45 600 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 DENND5AQ6IQ26 1287 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ALKAL1Q6UXT8 129 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 LYSMD3Q7Z3D4 306 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TRIM74Q86UV6 250 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TRIM73Q86UV7 250 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ZC3H7AQ8IWR0 971 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM102Q8N9M5 508 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 LEMD2Q8NC56 503 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 OR9Q1Q8NGQ5 310 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 OR52J3Q8NH60 311 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 NT5C3BQ969T7 300 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 ZHX1-C8orf76Q96EF9 292 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 GPATCH1Q9BRR8 931 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 C2orf49Q9BVC5 232 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 MAGEH1Q9H213 219 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 TOR3AQ9H497 397 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 INTS10Q9NVR2 710 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 PDP1Q9P0J1 537 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 RGS17Q9UGC6 210 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 DUSP12Q9UNI6 340 aa6.77□□□□□ -1.33
SYNPO2-206ENST00000610556 CHRNA1P02708 482 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 OR56A5P0C7T3 313 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SMIM18P0DKX4 95 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF26P17031 533 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 DNAJB1P25685 340 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ARNTP27540 789 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 GKP32189 559 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 RPIAP49247 311 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ARSFP54793 590 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CCL23P55773 120 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TUBA4AP68366 448 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TRAF3Q13114 568 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PMS2P3Q13401 168 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SERINC3Q13530 473 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 KRT33BQ14525 404 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TAF1AQ15573 450 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PLA2G4EQ3MJ16 856 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PABPC1LQ4VXU2 614 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CCDC92Q53HC0 331 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PSAPL1Q6NUJ1 521 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 BLOC1S3Q6QNY0 202 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 R3HCC1LQ7Z5L2 792 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 POC5Q8NA72 575 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 OR13J1Q8NGT2 312 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ZUFSPQ96AP4 578 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MYO19Q96H55 970 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 RBM4BQ9BQ04 359 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 RBM4Q9BWF3 364 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 NUSAP1Q9BXS6 441 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MRM3Q9HC36 420 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 KRT84Q9NSB2 600 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TREX1Q9NSU2 369 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SNX6Q9UNH7 406 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 RNF11Q9Y3C5 154 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MBLAC1A4D2B0 266 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MANSC4A6NHS7 340 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 UPK3BL1B0FP48 263 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 UPK3BL2E5RIL1 263 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 UBFD1O14562 309 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 XPNPEP2O43895 674 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CNOT3O75175 753 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PAPSS2O95340 614 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ESR1P03372 595 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 GPX3P22352 226 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SERPINA4P29622 427 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 RFC2P35250 354 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MAPKAPK2P49137 400 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ALDH9A1P49189 494 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PGFP49763 221 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PTPRRQ15256 657 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 DOK6Q6PKX4 331 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 KDELC1Q6UW63 502 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MAMDC4Q6UXC1 1216 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 UBE2R2Q712K3 238 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 LARP4Q71RC2 724 aaKnown RBP eCLIP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 UMODL1-AS1Q8N2C9 162 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SVOPQ8N4V2 548 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 AADATQ8N5Z0 425 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PACRGLQ8N7B6 248 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 HPS1Q92902 700 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 KCNN1Q92952 543 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PGAP3Q96FM1 320 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 PLEKHA8Q96JA3 519 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF597Q96LX8 424 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 COPS8Q99627 209 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ZBED2Q9BTP6 218 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TDRD1Q9BXT4 1180 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CACYBPQ9HB71 228 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM181Q9P2C4 612 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CD84Q9UIB8 345 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 VPS4AQ9UN37 437 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 SCML2Q9UQR0 700 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 CEPT1Q9Y6K0 416 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 OR6C75A6NL08 312 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 ANKRD66B4E2M5 251 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 MTX2O75431 263 aa6.76□□□□□ -1.33
SYNPO2-206ENST00000610556 IGSF6O95976 241 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms